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Sample GSM437743 Query DataSets for GSM437743
Status Public on Jan 13, 2010
Title MCF-7 100 ng rep2
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 100 ng
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 100 ng rep2.Avg_NBEADS
MCF-7 100 ng rep2.BEAD_STDERR
MCF-7 100 ng rep2.Detection Pval

Data table
ID_REF VALUE MCF-7 100 ng rep2.Avg_NBEADS MCF-7 100 ng rep2.BEAD_STDERR MCF-7 100 ng rep2.Detection Pval
ILMN_1762337 772.3347 36 78.20104 0
ILMN_2055271 97.14849 29 16.94101 0.01618123
ILMN_2383229 49.86545 30 8.751962 0.09061489
ILMN_1806310 42.50367 25 5.102728 0.2588997
ILMN_1779670 44.01734 42 9.482315 0.1941748
ILMN_2321282 47.69498 34 7.646728 0.1197411
ILMN_1772582 91.60862 39 12.07957 0.01618123
ILMN_1717783 235.9891 33 33.17545 0
ILMN_1814316 46.45732 33 8.708884 0.1294498
ILMN_2359168 60.08746 30 12.31444 0.04530744
ILMN_1731507 26.70878 31 7.732282 0.9190938
ILMN_1787689 46.89293 33 7.058266 0.1262136
ILMN_1745607 73.29993 36 10.83531 0.03559871
ILMN_2136495 139.5189 41 14.15586 0.003236246
ILMN_1668111 50.89463 32 10.73614 0.08414239
ILMN_2295559 32.1353 38 5.556578 0.7281553
ILMN_1735045 421.4381 43 52.0385 0
ILMN_1680754 47.01585 30 8.888189 0.1262136
ILMN_2375184 41.08622 48 6.307245 0.2977346
ILMN_1659452 43.64014 37 6.174914 0.2038835

Total number of rows: 24526

Table truncated, full table size 943 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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