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Sample GSM437750 Query DataSets for GSM437750
Status Public on Jan 13, 2010
Title MCF-7 1 ng rep1
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 1 ng
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 1 ng rep1.Avg_NBEADS
MCF-7 1 ng rep1.BEAD_STDERR
MCF-7 1 ng rep1.Detection Pval

Data table
ID_REF VALUE MCF-7 1 ng rep1.Avg_NBEADS MCF-7 1 ng rep1.BEAD_STDERR MCF-7 1 ng rep1.Detection Pval
ILMN_1762337 1447.755 34 76.19534 0
ILMN_2055271 104.338 27 5.587197 0.02912621
ILMN_2383229 43.01503 43 2.806929 0.4757282
ILMN_1806310 32.90332 28 2.128224 0.7961165
ILMN_1779670 40.89497 41 3.630479 0.5242718
ILMN_2321282 72.04301 38 3.635965 0.09708738
ILMN_1772582 120.4978 28 6.026336 0.009708738
ILMN_1717783 403.7008 31 23.75079 0
ILMN_1814316 42.00561 55 2.534823 0.4886732
ILMN_2359168 47.24607 44 2.868937 0.3624595
ILMN_1731507 31.96512 45 2.965473 0.815534
ILMN_1787689 67.25183 34 3.166343 0.1197411
ILMN_1745607 27.5338 39 2.523002 0.9158576
ILMN_2136495 27.29255 37 2.348562 0.9190938
ILMN_1668111 29.95878 31 3.968297 0.8705502
ILMN_2295559 35.74177 57 1.382012 0.7152104
ILMN_1735045 1069.999 50 69.82326 0
ILMN_1680754 59.72807 26 5.797325 0.1747573
ILMN_2375184 64.39861 52 3.254072 0.1391586
ILMN_1659452 78.09074 38 4.438884 0.09385113

Total number of rows: 24526

Table truncated, full table size 935 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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