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Sample GSM437752 Query DataSets for GSM437752
Status Public on Jan 13, 2010
Title MCF-7 250 pg rep1
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 250 pg
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 250 pg rep1.Avg_NBEADS
MCF-7 250 pg rep1.BEAD_STDERR
MCF-7 250 pg rep1.Detection Pval

Data table
ID_REF VALUE MCF-7 250 pg rep1.Avg_NBEADS MCF-7 250 pg rep1.BEAD_STDERR MCF-7 250 pg rep1.Detection Pval
ILMN_1762337 714.3701 28 22.92731 0
ILMN_2055271 279.5455 39 4.222683 0.0420712
ILMN_2383229 52.23242 20 4.320523 0.4368932
ILMN_1806310 40.10097 33 3.23018 0.6666667
ILMN_1779670 49.18513 46 3.190047 0.4854369
ILMN_2321282 75.27165 46 3.97453 0.2524272
ILMN_1772582 63.89762 35 4.134985 0.3300971
ILMN_1717783 415.4305 23 9.297325 0.009708738
ILMN_1814316 42.83023 28 3.053927 0.6245955
ILMN_2359168 53.56026 39 3.778194 0.433657
ILMN_1731507 37.05891 30 3.951754 0.7346278
ILMN_1787689 108.7303 32 4.128225 0.171521
ILMN_1745607 32.87608 34 4.392526 0.8122978
ILMN_2136495 32.9386 21 2.847992 0.8122978
ILMN_1668111 30.93261 38 3.011574 0.8543689
ILMN_2295559 35.85226 39 3.340237 0.7475728
ILMN_1735045 418.3687 37 7.364437 0.009708738
ILMN_1680754 127.3721 22 5.661277 0.1488673
ILMN_2375184 111.0785 42 3.579788 0.171521
ILMN_1659452 231.2043 30 3.717518 0.0776699

Total number of rows: 24526

Table truncated, full table size 957 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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