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Sample GSM437753 Query DataSets for GSM437753
Status Public on Jan 13, 2010
Title MCF-7 250 pg rep2
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics cell type: Breast Adenocarcinoma (MCF-7)
input: 250 pg
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
MCF-7 250 pg rep2.Avg_NBEADS
MCF-7 250 pg rep2.BEAD_STDERR
MCF-7 250 pg rep2.Detection Pval

Data table
ID_REF VALUE MCF-7 250 pg rep2.Avg_NBEADS MCF-7 250 pg rep2.BEAD_STDERR MCF-7 250 pg rep2.Detection Pval
ILMN_1762337 1329.675 42 47.49179 0
ILMN_2055271 381.9134 30 6.09687 0.05177994
ILMN_2383229 44.71994 39 3.709343 0.5954692
ILMN_1806310 52.64437 32 4.585 0.4951456
ILMN_1779670 47.88398 31 2.949564 0.5501618
ILMN_2321282 104.552 43 3.985726 0.2265372
ILMN_1772582 108.2137 33 3.720118 0.223301
ILMN_1717783 655.5003 34 10.01783 0.006472492
ILMN_1814316 59.44622 30 6.318593 0.407767
ILMN_2359168 56.2305 37 3.89132 0.4595469
ILMN_1731507 25.24057 28 3.374693 0.9644013
ILMN_1787689 150.3482 30 3.095893 0.1747573
ILMN_1745607 908.7512 38 17.90765 0
ILMN_2136495 25.47382 34 2.538662 0.9611651
ILMN_1668111 26.28101 25 5.698201 0.9514563
ILMN_2295559 36.73678 47 3.805555 0.7799353
ILMN_1735045 429.661 41 4.93008 0.04530744
ILMN_1680754 63.69437 35 4.637949 0.3754045
ILMN_2375184 171.0398 38 4.683934 0.1682848
ILMN_1659452 375.4498 48 4.952362 0.05501618

Total number of rows: 24526

Table truncated, full table size 963 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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