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Sample GSM437941 Query DataSets for GSM437941
Status Public on Jan 13, 2010
Title FFPE #1-200 ng rep2
Sample type RNA
 
Source name Human ovarian tumor
Organism Homo sapiens
Characteristics gender: Female
tissue: Ovary
Extracted molecule total RNA
Extraction protocol RNA was extracted with a modified protocol of the RNeasy FFPE Kit (Qiagen)
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17572 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Ovarian Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
FFPE #1-200 rep2.Avg_NBEADS
FFPE #1-200 rep2.BEAD_STDERR
FFPE #1-200 rep2.Detection Pval

Data table
ID_REF VALUE FFPE #1-200 rep2.Avg_NBEADS FFPE #1-200 rep2.BEAD_STDERR FFPE #1-200 rep2.Detection Pval
ILMN_1762337 383.4969 52 21.26882 0
ILMN_2055271 372.6782 35 9.311725 0
ILMN_2383229 538.6344 24 14.20399 0
ILMN_1806310 57.7917 35 4.684115 0.08414239
ILMN_1779670 1750.502 49 36.95042 0
ILMN_2321282 66.26949 47 3.931562 0.06472492
ILMN_1772582 113.0153 42 5.536576 0.01618123
ILMN_1717783 48.07791 28 3.679817 0.1682848
ILMN_1814316 7278.413 36 224.5098 0
ILMN_2359168 6993.719 42 121.7619 0
ILMN_1731507 135.3753 33 8.258374 0.01618123
ILMN_1787689 73.67543 41 4.077709 0.05501618
ILMN_1745607 4285.238 35 188.4394 0
ILMN_2136495 106.0104 50 4.035695 0.01941748
ILMN_1668111 325.5969 42 9.343225 0
ILMN_2295559 47.08858 48 2.696137 0.197411
ILMN_1735045 476.233 40 34.28522 0
ILMN_1680754 50.11446 40 3.659331 0.1521036
ILMN_2375184 198.4384 62 5.919185 0.009708738
ILMN_1659452 184.3854 36 7.008784 0.01294498

Total number of rows: 24526

Table truncated, full table size 922 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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