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Sample GSM437952 Query DataSets for GSM437952
Status Public on Jan 13, 2010
Title FFPE #4-50 ng rep2
Sample type RNA
 
Source name Human ovarian tumor
Organism Homo sapiens
Characteristics gender: Female
tissue: Ovary
Extracted molecule total RNA
Extraction protocol RNA was extracted with a modified protocol of the RNeasy FFPE Kit (Qiagen)
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17572 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Ovarian Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
FFPE #4-50 rep2.Avg_NBEADS
FFPE #4-50 rep2.BEAD_STDERR
FFPE #4-50 rep2.Detection Pval

Data table
ID_REF VALUE FFPE #4-50 rep2.Avg_NBEADS FFPE #4-50 rep2.BEAD_STDERR FFPE #4-50 rep2.Detection Pval
ILMN_1762337 763.5433 46 39.44007 0
ILMN_2055271 505.4659 33 14.52015 0
ILMN_2383229 312.0109 35 9.202673 0
ILMN_1806310 49.85176 28 5.371385 0.2783172
ILMN_1779670 795.8911 41 23.7579 0
ILMN_2321282 102.0865 42 4.737387 0.0420712
ILMN_1772582 361.6638 33 13.98458 0
ILMN_1717783 267.4022 27 17.63389 0.003236246
ILMN_1814316 5710.132 31 218.9073 0
ILMN_2359168 5391.127 39 177.1523 0
ILMN_1731507 150.423 34 7.300951 0.01618123
ILMN_1787689 63.48231 41 3.962825 0.1035599
ILMN_1745607 2836.49 36 137.0205 0
ILMN_2136495 315.5161 28 13.49347 0
ILMN_1668111 41.72855 38 2.747532 0.5728155
ILMN_2295559 41.48655 35 2.887476 0.579288
ILMN_1735045 840.739 44 29.28006 0
ILMN_1680754 65.00951 31 3.705474 0.09708738
ILMN_2375184 130.25 45 5.494596 0.02588997
ILMN_1659452 134.4555 46 5.617286 0.01941748

Total number of rows: 24526

Table truncated, full table size 921 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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