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Sample GSM437955 Query DataSets for GSM437955
Status Public on Jan 13, 2010
Title R/M 0/100 rep1
Sample type RNA
 
Source name Breast Adenocarcinoma (MCF-7) Total RNA (Ambion Cat# AM7846)
Organism Homo sapiens
Characteristics ratio mix: 100% MCF-7
cell type: Breast Adenocarcinoma (MCF-7)
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17573 Whole-Genome Gene Expression Profiling of FFPE Raji and MCF-7 Mixed Ratio Tissue Samples
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
R/M 0/100 rep1.Avg_NBEADS
R/M 0/100 rep1.BEAD_STDERR
R/M 0/100 rep1.Detection Pval

Data table
ID_REF VALUE R/M 0/100 rep1.Avg_NBEADS R/M 0/100 rep1.BEAD_STDERR R/M 0/100 rep1.Detection Pval
ILMN_1762337 4875.15 50 270.8548 0
ILMN_2055271 208.5082 19 28.56592 0.03236246
ILMN_2383229 48.81266 32 17.30593 0.3883495
ILMN_1806310 12.3672 21 18.02484 0.9288026
ILMN_1779670 31.63695 45 13.50236 0.6860842
ILMN_2321282 100.9964 43 11.65336 0.07443365
ILMN_1772582 424.3629 39 26.75756 0.009708738
ILMN_1717783 1264.85 30 89.1212 0
ILMN_1814316 51.69379 37 14.44196 0.3365696
ILMN_2359168 55.2471 34 13.41443 0.2880259
ILMN_1731507 15.29534 35 13.94344 0.9029126
ILMN_1787689 77.74635 31 19.53494 0.1294498
ILMN_1745607 173.3956 24 30.48754 0.04530744
ILMN_2136495 388.8598 27 24.69831 0.01294498
ILMN_1668111 47.77175 44 15.84078 0.3980583
ILMN_2295559 26.15113 46 18.94723 0.7669903
ILMN_1735045 3437.252 34 242.8955 0
ILMN_1680754 45.50501 28 19.2506 0.4433657
ILMN_2375184 85.25377 38 16.1851 0.1067961
ILMN_1659452 117.9363 39 20.42217 0.06148867

Total number of rows: 24526

Table truncated, full table size 935 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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