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Sample GSM437981 Query DataSets for GSM437981
Status Public on Jan 13, 2010
Title Raji 100 ng IVT-based rep2
Sample type RNA
 
Source name Burkitts Lymphoma (Raji) Total RNA (Ambion Cat# AM7876)
Organism Homo sapiens
Characteristics platform_id: IVT-based
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label biotin-streptavidin Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 10, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17575 Whole-Genome Gene Expression Profiling of FFPE Tissue Samples with WG-DASL and IVT-based assays
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
Raji-100 DH rep2.Avg_NBEADS
Raji-100 DH rep2.BEAD_STDERR
Raji-100 DH rep2.Detection Pval

Data table
ID_REF VALUE Raji-100 DH rep2.Avg_NBEADS Raji-100 DH rep2.BEAD_STDERR Raji-100 DH rep2.Detection Pval
ILMN_1762337 48.54158 44 3.026272 0.4433657
ILMN_2055271 207.4672 39 3.606699 0.05825243
ILMN_2383229 52.20625 43 3.751866 0.381877
ILMN_1806310 35.11083 37 3.421878 0.9190938
ILMN_1779670 66.33938 44 3.706634 0.2491909
ILMN_2321282 152.8965 33 4.402035 0.08414239
ILMN_1772582 47.90965 34 3.213161 0.4595469
ILMN_1717783 40.21505 46 2.68775 0.7055016
ILMN_1814316 69.15775 36 3.773615 0.2265372
ILMN_2359168 113.2337 37 4.669522 0.1521036
ILMN_1731507 48.03647 42 2.939333 0.4595469
ILMN_1787689 272.534 40 3.600945 0.03883495
ILMN_1745607 37.75058 41 2.672368 0.815534
ILMN_2136495 35.11593 28 3.315481 0.9190938
ILMN_1668111 50.21777 44 3.540386 0.4110032
ILMN_2295559 47.00058 34 3.649356 0.4789644
ILMN_1735045 2952.218 43 33.80452 0
ILMN_1680754 293.8023 35 4.487169 0.03236246
ILMN_2375184 44.84375 44 2.96769 0.5533981
ILMN_1659452 90.2473 48 4.321536 0.1909385

Total number of rows: 24526

Table truncated, full table size 991 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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