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Sample GSM46465 Query DataSets for GSM46465
Status Public on Dec 31, 2005
Title KYSE220cDNA_1
Sample type RNA
 
Channel 1
Source name KYSE220
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name HEEC-1
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description Expression profiles of esophageal cancer cell line established and given from Kyoto University. Reference sample is a non-cancerous esophageal epithelial cell strain HEEC-1.
 
Submission date Mar 29, 2005
Last update date Jul 11, 2005
Contact name Keiko Hiyama
E-mail(s) khiyama@hiroshima-u.ac.jp
Phone 81-82-257-5841
Fax 81-82-256-7105
Organization name Hiroshima University
Department Research Institute for Radiation Biology and Medicine
Lab Dept. Translational Cancer Research
Street address 1-2-3 Kasumi, Minami-ku
City Hiroshima
State/province Hiroshima
ZIP/Postal code 734-8553
Country Japan
 
Platform ID GPL1530
Series (1)
GSE2454 Chemosensitivity prediciton in esophageal cancer cell line using cDNA microarray

Data table header descriptions
ID_REF
Flagged As Quality of signal (normal or abnormal)
Spot Mean Intensity (cy3) Raw signal intensity of cy3
Spot Mean Intensity (cy5) Raw signal intensity of cy5
Background Median Intensity (cy3) Background signal of cy3
Background Median Intensity (cy5) Background signal of cy5
VALUE Log2(Cy3/Cy5) with global normalization

Data table
ID_REF Flagged As Spot Mean Intensity (cy3) Spot Mean Intensity (cy5) Background Median Intensity (cy3) Background Median Intensity (cy5) VALUE
1 NORMAL 3991.01 3523.87 2196 2067.5 0.067293682
2 NORMAL 3173.04 2219.248 2127.5 1942 1.680678027
3 NORMAL 3895.92 3398.83 1983.5 1675 -0.08453938
4 NORMAL 2929.618 2693.847 1884 1460 -0.473128898
5 NORMAL 10449.76 9336.74 1862 1393 -0.121857803
6 NORMAL 4104.54 3317.77 1685 1356 0.06825561
7 NORMAL 3720.53 2716.068 1744 1429 0.384560303
8 NORMAL 3383.59 1926.839 1769 1504.5 1.700373209
9 NORMAL 3287.87 2635.358 1801 1417 0.053019129
10 NORMAL 7005.92 5176.26 1643 1238 0.211139101
11 NORMAL 3707.25 2506.218 1411 1145 0.520060316
12 NORMAL 2485.725 1890.29 1346.5 1268.5 0.63923212
13 NORMAL 12346.57 9871.34 1363 1152 0.098734938
14 NORMAL 2110.677 1787.008 1292 946 -0.273146431
15 NORMAL 2335.564 1530.128 991.5 778 0.603230453
16 NORMAL 3628.82 2061.869 877 691 0.770974119
17 NORMAL 2205.876 1343.861 933.5 640.5 0.620866545
18 NORMAL 2319.774 2111.308 751.5 460.5 -0.308315966
19 NORMAL 3027.877 2741.169 670 539 -0.135758
20 NORMAL 2157.061 1777.053 644 428 -0.068798148

Total number of rows: 21168

Table truncated, full table size 1068 Kbytes.




Supplementary data files not provided
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