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Sample GSM46490 Query DataSets for GSM46490
Status Public on Dec 31, 2005
Title KYSE1250cDNA_2
Sample type RNA
 
Channel 1
Source name KYSE1250
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name HEEC-1
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description Expression profiles of esophageal cancer cell line established and given from Kyoto University. Reference sample is a non-cancerous esophageal epithelial cell strain HEEC-1.
 
Submission date Mar 29, 2005
Last update date Jul 11, 2005
Contact name Keiko Hiyama
E-mail(s) khiyama@hiroshima-u.ac.jp
Phone 81-82-257-5841
Fax 81-82-256-7105
Organization name Hiroshima University
Department Research Institute for Radiation Biology and Medicine
Lab Dept. Translational Cancer Research
Street address 1-2-3 Kasumi, Minami-ku
City Hiroshima
State/province Hiroshima
ZIP/Postal code 734-8553
Country Japan
 
Platform ID GPL1530
Series (1)
GSE2454 Chemosensitivity prediciton in esophageal cancer cell line using cDNA microarray

Data table header descriptions
ID_REF
Flagged As Quality of signal (normal or abnormal)
Spot Mean Intensity (cy3) Raw signal intensity of cy3
Spot Mean Intensity (cy5) Raw signal intensity of cy5
Background Median Intensity (cy3) Background signal of cy3
Background Median Intensity (cy5) Background signal of cy5
VALUE Log2(Cy3/Cy5) with global normalization

Data table
ID_REF Flagged As Spot Mean Intensity (cy3) Spot Mean Intensity (cy5) Background Median Intensity (cy3) Background Median Intensity (cy5) VALUE
1 NORMAL 1614.343 1337.723 1473 1333 4.580616859
2 NORMAL 3267.26 2651.779 1835.5 1682.5 0.240069549
3 NORMAL 3889.53 3273.65 2586 2387.5 0.234064723
4 NORMAL 4511.09 3881.53 3438 3046 0.038271314
5 NORMAL 10727.29 11424.89 3697 3506.5 -0.494359155
6 NORMAL 4528.29 3974.54 3845 3575.5 0.453228412
7 NORMAL 8235.54 6827.27 3732 3821.5 0.260588625
8 NORMAL 4406.31 4029.69 3751.5 3829 1.383371391
9 NORMAL 3333.09 3604.73 3719 4005
10 NORMAL 4830.2 5790.43 3923.5 3966 -1.33148484
11 NORMAL 3251.86 4523.64 3617 3718
12 NORMAL 3626.2 3432.74 3253 3332.5 1.573754435
13 NORMAL 15144.29 18239.02 2732 2944 -0.624028915
14 NORMAL 2275.185 2277.267 2464 2505
15 NORMAL 1916.474 1677.102 2044 2172
16 NORMAL 2489.861 2341.044 1896.5 1906 0.125012553
17 NORMAL 1489.745 1233.19 1614.5 1756.5
18 NORMAL 1932.778 2162.141 1602.5 1531.5 -1.255874324
19 NORMAL 2091.634 3744.45 1489 1397 -2.284476685
20 NORMAL 1521.85 1787.88 1313 1234 -1.729842533

Total number of rows: 21168

Table truncated, full table size 1014 Kbytes.




Supplementary data files not provided
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