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Sample GSM465864 Query DataSets for GSM465864
Status Public on Nov 04, 2009
Title D0 embryonic stem (ES) cells
Sample type RNA
 
Source name D0 embryonic stem (ES) cells
Organism Mus musculus
Characteristics cell type: D0 embryonic stem (ES)
cell line: R1
Extracted molecule total RNA
Extraction protocol Cell total RNA was extracted by using trizol reagent. The total RNA was then purified by using Qiagen Rnaesy mini Kit
Label Cy3
Label protocol Standard manufacturer protocol (www.agilent.com)
 
Hybridization protocol Standard manufacturer protocol (www.agilent.com)
Scan protocol Standard manufacturer protocol (www.agilent.com)
Description ES cells (D0)
Data processing Raw data was extracted from scan image by FeatrueExtract software(Agilent). Data normaliztion and further data analysis were carried out by using GeneSpring software (Agilent).
 
Submission date Oct 28, 2009
Last update date Nov 03, 2009
Contact name Huang Chengyang
E-mail(s) hcy360@21cn.com
Organization name Institute of biochemistry and cell biology
Street address Yue Yang Road 320
City shanghai
ZIP/Postal code 200032
Country China
 
Platform ID GPL7202
Series (2)
GSE18772 Mouse ES cell neural differentiation
GSE18863 KIAA1718 is a dual specific histone demethylase involved in early neural development

Data table header descriptions
ID_REF
VALUE normalized signal intensity
flag Present Call

Data table
ID_REF VALUE flag
GE_BrightCorner 13.834877 P
DarkCorner 5.2500076 M
A_52_P616356 4.9991593 A
A_52_P580582 6.320676 P
A_52_P403405 4.9858856 A
A_52_P819156 5.1892495 A
A_51_P331831 12.540703 M
A_51_P430630 4.9680023 A
A_52_P502357 4.96574 A
A_52_P299964 4.9597216 A
A_51_P356389 6.8260612 A
A_52_P684402 11.342795 M
A_51_P414208 4.94998 A
A_51_P280918 11.292632 M
A_52_P613688 10.680739 M
A_52_P258194 9.434298 M
A_52_P229271 11.94313 M
A_52_P214630 7.637707 P
A_52_P579519 10.883309 M
A_52_P979997 4.937258 A

Total number of rows: 41252

Table truncated, full table size 987 Kbytes.




Supplementary file Size Download File type/resource
GSM465864_US80803205_251486816813_S01_GE1_v5_95_Feb07_1_1.txt.gz 9.2 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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