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Sample GSM46817 Query DataSets for GSM46817
Status Public on Mar 31, 2005
Title Lung - 1020
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.4
Patient Age: 70-80
Gender: Male
Ethnic Background: American Indian
Tobacco Use : Yes
Years of Tobacco Use: 31-35
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 18
Presenting Symptoms: Persistent Cough
Presenting Symptoms: SOB
Presenting Symptoms: Weight Loss
Workplace or household smokers?: No
Pathological T: 2
Pathological N: 0
Pathological M: 0
Pathological Stage: 1B
Pathological Grade: 3
Pathological Multiple Tumors: Yes
Primary Site: Lung
Histology: Squamous cell carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 878.4 P 0.000754
AFFX-BioB-M_at 1612.2 P 0.000225
AFFX-BioB-3_at 1008.2 P 0.000169
AFFX-BioC-5_at 2836.9 P 4.4e-005
AFFX-BioC-3_at 3289.1 P 4.4e-005
AFFX-BioDn-5_at 8269 P 4.4e-005
AFFX-BioDn-3_at 12005.1 P 4.4e-005
AFFX-CreX-5_at 30836.6 P 5.2e-005
AFFX-CreX-3_at 37365.8 P 4.4e-005
AFFX-DapX-5_at 76.5 M 0.054213
AFFX-DapX-M_at 14 A 0.617401
AFFX-DapX-3_at 108.8 A 0.147939
AFFX-LysX-5_at 86.3 P 0.023929
AFFX-LysX-M_at 30.6 A 0.783476
AFFX-LysX-3_at 68.6 P 0.012547
AFFX-PheX-5_at 3.3 A 0.9273
AFFX-PheX-M_at 4.1 A 0.987453
AFFX-PheX-3_at 100.7 A 0.48511
AFFX-ThrX-5_at 43.7 A 0.617401
AFFX-ThrX-M_at 5.8 A 0.804734

Total number of rows: 54675

Table truncated, full table size 1451 Kbytes.




Supplementary file Size Download File type/resource
GSM46817.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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