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Sample GSM46933 Query DataSets for GSM46933
Status Public on Mar 31, 2005
Title Breast - 29303
Sample type RNA
 
Source name Breast
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.2
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 6-10
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 150
Prior Therapy: Chemotherapy
Mammogram: Yes
Number of years in which a mammogram was obtained?: 11-15
Oral contraceptives?: No
Oophorectomy?: No
Fibrocystic disease?: No
Mammogram calcifications?: No
Primary Site: Breast
Histology: Ductal Carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE31519
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 809.1 P 0.000581
AFFX-BioB-M_at 982.2 P 0.000127
AFFX-BioB-3_at 603.7 P 0.000258
AFFX-BioC-5_at 1983.3 P 4.4e-005
AFFX-BioC-3_at 2184.5 P 5.2e-005
AFFX-BioDn-5_at 5887.7 P 4.4e-005
AFFX-BioDn-3_at 8863.9 P 4.4e-005
AFFX-CreX-5_at 20648.8 P 4.4e-005
AFFX-CreX-3_at 25344.3 P 4.4e-005
AFFX-DapX-5_at 5.6 A 0.783496
AFFX-DapX-M_at 36.6 A 0.470241
AFFX-DapX-3_at 44.6 A 0.327079
AFFX-LysX-5_at 19.7 A 0.5
AFFX-LysX-M_at 6 A 0.949771
AFFX-LysX-3_at 42.5 A 0.095667
AFFX-PheX-5_at 35.8 A 0.485109
AFFX-PheX-M_at 6.1 A 0.957038
AFFX-PheX-3_at 134.4 A 0.195266
AFFX-ThrX-5_at 26.7 A 0.440646
AFFX-ThrX-M_at 4.2 A 0.960339

Total number of rows: 54675

Table truncated, full table size 1442 Kbytes.




Supplementary file Size Download File type/resource
GSM46933.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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