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Sample GSM46936 Query DataSets for GSM46936
Status Public on Mar 31, 2005
Title Lung - 31812
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 80-90
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 46-50
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 30
Primary Site: Lung
Histology: Squamous cell carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 365.6 P 0.000754
AFFX-BioB-M_at 451.6 P 0.000127
AFFX-BioB-3_at 235.7 P 0.001796
AFFX-BioC-5_at 719.3 P 7e-005
AFFX-BioC-3_at 1219.6 P 4.4e-005
AFFX-BioDn-5_at 2452 P 5.2e-005
AFFX-BioDn-3_at 4186.9 P 7e-005
AFFX-CreX-5_at 10198.4 P 4.4e-005
AFFX-CreX-3_at 13714 P 4.4e-005
AFFX-DapX-5_at 161.7 P 0.000195
AFFX-DapX-M_at 1078.9 P 0.000581
AFFX-DapX-3_at 2184.9 P 6e-005
AFFX-LysX-5_at 98.7 P 0.00034
AFFX-LysX-M_at 194.4 P 0.003595
AFFX-LysX-3_at 376.4 P 4.4e-005
AFFX-PheX-5_at 99.2 P 0.000581
AFFX-PheX-M_at 205.8 P 0.000258
AFFX-PheX-3_at 341.7 P 0.001248
AFFX-ThrX-5_at 62.7 A 0.095667
AFFX-ThrX-M_at 183.1 P 0.000225

Total number of rows: 54675

Table truncated, full table size 1443 Kbytes.




Supplementary file Size Download File type/resource
GSM46936.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table
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