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Sample GSM46945 Query DataSets for GSM46945
Status Public on Mar 31, 2005
Title Liver - 31830
Sample type RNA
 
Source name Liver
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 40-50
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 31-35
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 51
Presenting Symptoms: Abdominal Pain
Presenting Symptoms: Bright red stools
Presenting Symptoms: Constipation
Presenting Symptoms: Vomiting
Screening studies performed?: Yes
Diagnosis made by: Colonoscopy
Pathological T: 3
Pathological N: 0
Pathological M: 1
Pathological Metastatic Sites: Hepatic
Pathological Stage: 4
Pathological Grade: 2
Primary Site: Colon
Histology: Metastatic Adenocarcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1122.4 P 0.000225
AFFX-BioB-M_at 1659.3 P 5.2e-005
AFFX-BioB-3_at 1035.8 P 4.4e-005
AFFX-BioC-5_at 3614.8 P 4.4e-005
AFFX-BioC-3_at 4224.7 P 4.4e-005
AFFX-BioDn-5_at 9708 P 4.4e-005
AFFX-BioDn-3_at 11582.3 P 4.4e-005
AFFX-CreX-5_at 34865 P 4.4e-005
AFFX-CreX-3_at 40069.2 P 5.2e-005
AFFX-DapX-5_at 339.1 P 0.000127
AFFX-DapX-M_at 1502.7 P 0.000662
AFFX-DapX-3_at 4004.4 P 4.4e-005
AFFX-LysX-5_at 168.5 P 0.001102
AFFX-LysX-M_at 325.9 P 0.002556
AFFX-LysX-3_at 678.5 P 5.2e-005
AFFX-PheX-5_at 102.7 P 0.023929
AFFX-PheX-M_at 249.5 P 0.012547
AFFX-PheX-3_at 385.9 P 0.000195
AFFX-ThrX-5_at 74.8 A 0.131361
AFFX-ThrX-M_at 258.5 P 0.00141

Total number of rows: 54675

Table truncated, full table size 1449 Kbytes.




Supplementary file Size Download File type/resource
GSM46945.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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