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Sample GSM46952 Query DataSets for GSM46952
Status Public on Mar 31, 2005
Title Breast - 31861
Sample type RNA
 
Source name Breast
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 40-50
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Years of Tobacco Use: None
Family History of Cancer?: No
Mammogram: Yes
Number of years in which a mammogram was obtained?: 0-5
Oral contraceptives?: Yes
Number of years of use? (Oral contraceptives): 11-15
Primary Site: Breast
Histology: Ductal Carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE31519
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 419.9 P 0.000754
AFFX-BioB-M_at 467.9 P 9.5e-005
AFFX-BioB-3_at 331.4 P 0.004998
AFFX-BioC-5_at 979.5 P 5.2e-005
AFFX-BioC-3_at 1372.2 P 5.2e-005
AFFX-BioDn-5_at 2485.7 P 4.4e-005
AFFX-BioDn-3_at 4747.5 P 6e-005
AFFX-CreX-5_at 10884.5 P 4.4e-005
AFFX-CreX-3_at 15331.3 P 4.4e-005
AFFX-DapX-5_at 249.4 P 9.5e-005
AFFX-DapX-M_at 896.6 P 0.000754
AFFX-DapX-3_at 1781.2 P 5.2e-005
AFFX-LysX-5_at 65.8 P 0.005565
AFFX-LysX-M_at 190.6 P 0.023929
AFFX-LysX-3_at 546.9 P 0.00034
AFFX-PheX-5_at 40.3 A 0.095667
AFFX-PheX-M_at 160.5 P 0.018281
AFFX-PheX-3_at 274.9 P 0.002556
AFFX-ThrX-5_at 95.7 P 0.015183
AFFX-ThrX-M_at 152.2 P 0.002556

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM46952.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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