NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM46955 Query DataSets for GSM46955
Status Public on Mar 31, 2005
Title Breast - 31871
Sample type RNA
 
Source name Breast
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.56
Patient Age: 80-90
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 24
Primary Site: Breast
Histology: Ductal Carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 348.1 P 0.000972
AFFX-BioB-M_at 431.7 P 7e-005
AFFX-BioB-3_at 291.1 P 0.003212
AFFX-BioC-5_at 882.9 P 6e-005
AFFX-BioC-3_at 1363.2 P 5.2e-005
AFFX-BioDn-5_at 2630 P 4.4e-005
AFFX-BioDn-3_at 4616.8 P 8.1e-005
AFFX-CreX-5_at 11074.3 P 4.4e-005
AFFX-CreX-3_at 14651 P 4.4e-005
AFFX-DapX-5_at 112.3 P 0.002023
AFFX-DapX-M_at 637.1 P 0.000972
AFFX-DapX-3_at 1127.7 P 8.1e-005
AFFX-LysX-5_at 76.8 P 0.004998
AFFX-LysX-M_at 148 A 0.089478
AFFX-LysX-3_at 299.4 P 6e-005
AFFX-PheX-5_at 42.7 A 0.116113
AFFX-PheX-M_at 109.9 P 0.012547
AFFX-PheX-3_at 206.1 P 0.006871
AFFX-ThrX-5_at 41.5 A 0.195266
AFFX-ThrX-M_at 120.8 P 0.042962

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM46955.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap