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Sample GSM46973 Query DataSets for GSM46973
Status Public on Mar 31, 2005
Title Lung - 8280
Sample type RNA
 
Source name Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.3
Patient Age: 60-70
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 41-45
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 22
Presenting Symptoms: SOB
Presenting Symptoms: Weight Loss
Workplace or household smokers?: No
Pathological T: 2
Pathological N: 0
Pathological M: 0
Pathological Stage: 1B
Pathological Grade: 2
Primary Site: Lung
Histology: Squamous cell carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 16.1 A 0.559354
AFFX-BioB-M_at 88.1 A 0.102165
AFFX-BioB-3_at 23.1 A 0.876428
AFFX-BioC-5_at 230.2 P 0.001796
AFFX-BioC-3_at 138.7 P 0.000972
AFFX-BioDn-5_at 336.4 P 0.005565
AFFX-BioDn-3_at 847 P 0.002867
AFFX-CreX-5_at 1857.4 P 4.4e-005
AFFX-CreX-3_at 3456 P 4.4e-005
AFFX-DapX-5_at 277.8 P 0.00034
AFFX-DapX-M_at 615.2 P 0.000972
AFFX-DapX-3_at 1092.1 P 0.00011
AFFX-LysX-5_at 62.1 A 0.067678
AFFX-LysX-M_at 85.8 A 0.083592
AFFX-LysX-3_at 197.2 P 0.000297
AFFX-PheX-5_at 62.4 M 0.054213
AFFX-PheX-M_at 121.5 P 0.026111
AFFX-PheX-3_at 210.3 P 0.030976
AFFX-ThrX-5_at 126.2 P 0.009337
AFFX-ThrX-M_at 156.7 P 0.007616

Total number of rows: 54675

Table truncated, full table size 1444 Kbytes.




Supplementary file Size Download File type/resource
GSM46973.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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