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Sample GSM475609 Query DataSets for GSM475609
Status Public on Nov 25, 2009
Title 0 ng/hr leptin_1
Sample type RNA
 
Source name adult male liver, control
Organism Mus musculus
Characteristics tissue: liver
agent: leptin
dose: 0 ng/hr
time: 12 days
Treatment protocol Animals were treated for 12 days with leptin at defined doses.
Extracted molecule total RNA
Extraction protocol Livers were extracted and flash frozen and later processed for RNA using a Trizol protocol.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description adult male mouse
4240351001_A
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Nov 25, 2009
Last update date Mar 08, 2017
Contact name Kristina Hedbacker
E-mail(s) kristina.hedbaker@rockefeller.edu
Organization name Rockefeller University
Street address 1230 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL6885
Series (1)
GSE19185 Low dose Leptin (25 ng/hr and 12.5 ng/hr) in ob/ob mice

Data table header descriptions
ID_REF
VALUE quantile-normalised signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1220234 195.2173 0
ILMN_2592166 128.2577 0
ILMN_3158509 483.1416 0
ILMN_1236788 201.6148 0
ILMN_2881950 403.6066 0
ILMN_2930897 174.0351 0
ILMN_2860915 1609.978 0
ILMN_2818498 1159.405 0
ILMN_2798129 265.9138 0
ILMN_1254721 1111.365 0
ILMN_1227404 491.7898 0
ILMN_2680054 361.2603 0
ILMN_1216720 136.2578 0
ILMN_2965669 200.2319 0
ILMN_2693922 378.5444 0
ILMN_3052260 228.3777 0
ILMN_3128725 233.2956 0
ILMN_2835423 514.2397 0
ILMN_1213805 401.9156 0
ILMN_2655184 1347.662 0

Total number of rows: 25697

Table truncated, full table size 712 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table
Processed data are available on Series record

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