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Sample GSM475610 Query DataSets for GSM475610
Status Public on Nov 25, 2009
Title 0 ng/hr leptin_2
Sample type RNA
 
Source name adult male liver, control
Organism Mus musculus
Characteristics tissue: liver
agent: leptin
dose: 0 ng/hr
time: 12 days
Treatment protocol Animals were treated for 12 days with leptin at defined doses.
Extracted molecule total RNA
Extraction protocol Livers were extracted and flash frozen and later processed for RNA using a Trizol protocol.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description adult male mouse
4240351001_B
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Nov 25, 2009
Last update date Mar 08, 2017
Contact name Kristina Hedbacker
E-mail(s) kristina.hedbaker@rockefeller.edu
Organization name Rockefeller University
Street address 1230 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL6885
Series (1)
GSE19185 Low dose Leptin (25 ng/hr and 12.5 ng/hr) in ob/ob mice

Data table header descriptions
ID_REF
VALUE quantile-normalised signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1220234 171.5419 0
ILMN_2592166 111.5106 0
ILMN_3158509 395.0007 0
ILMN_1236788 86.83656 0
ILMN_2881950 304.061 0
ILMN_2930897 89.75662 0
ILMN_2860915 1023.869 0
ILMN_2818498 793.1111 0
ILMN_2798129 255.97 0
ILMN_1254721 1014.065 0
ILMN_1227404 462.9042 0
ILMN_2680054 331.0427 0
ILMN_1216720 141.7098 0
ILMN_2965669 99.23768 0
ILMN_2693922 619.8819 0
ILMN_3052260 278.5497 0
ILMN_3128725 300.1766 0
ILMN_2835423 411.1149 0
ILMN_1213805 410.0119 0
ILMN_2655184 1072.813 0

Total number of rows: 25697

Table truncated, full table size 712 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table
Processed data are available on Series record

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