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Sample GSM48141 Query DataSets for GSM48141
Status Public on Apr 29, 2005
Title Genome wide transcriptional oscillation gates DNA replication AFFY2_3
Sample type RNA
 
Source name time series sampling continuous gated synchrony yeast culture
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Description Time series , cycle 2, sample 3, phase 89.3 degrees
This sample is also known as AFFY2_3.
Sample_strain: IFO 0233 diploid
Keywords = oscillation, attractor, DNA-replication, redox gating, quantized,
 
Submission date Apr 12, 2005
Last update date May 27, 2005
Contact name Robert R Klevecz
E-mail(s) rklevecz@coh.org
Phone 6263018348
Organization name Beckman Research Institute of the City of Hope
Department Biology
Lab Cellular Dynamics
Street address 1450 E. Duarte Rd.
City Duarte
State/province CA
ZIP/Postal code 91010
Country USA
 
Platform ID GPL90
Series (1)
GSE2583 Genome_Wide_Oscillations_in_Yeast

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 4 A 0.843268
AFFX-MurIL10_at 0.8 A 0.957038
AFFX-MurIL4_at 0.4 A 0.963431
AFFX-MurFAS_at 4 A 0.645547
AFFX-BioB-5_at 123.1 P 0.012547
AFFX-BioB-M_at 164.8 P 0.00011
AFFX-BioB-3_at 176.6 P 0.001593
AFFX-BioC-5_at 252.2 P 0.00141
AFFX-BioC-3_at 219.5 P 0.00034
AFFX-BioDn-5_at 268 P 0.000044
AFFX-BioDn-3_at 1784.7 P 0.000044
AFFX-CreX-5_at 3516.1 P 0.000044
AFFX-CreX-3_at 4357.5 P 0.000044
AFFX-BioB-5_st 10.6 A 0.52976
AFFX-BioB-M_st 18.3 A 0.574038
AFFX-BioB-3_st 5.7 A 0.724854
AFFX-BioC-5_st 5.3 A 0.794268
AFFX-BioC-3_st 2.2 A 0.804734
AFFX-BioDn-5_st 21 A 0.5
AFFX-BioDn-3_st 32.9 A 0.0727

Total number of rows: 9335

Table truncated, full table size 225 Kbytes.




Supplementary data files not provided

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