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Status
Public on Apr 29, 2005
Title
Genome wide transcriptional oscillation gates DNA replication AFFY2_3
Sample type
RNA
Source name
time series sampling continuous gated synchrony yeast culture
Organism
Saccharomyces cerevisiae
Extracted molecule
total RNA
Description
Time series , cycle 2, sample 3, phase 89.3 degrees This sample is also known as AFFY2_3. Sample_strain: IFO 0233 diploid Keywords = oscillation, attractor, DNA-replication, redox gating, quantized,
Submission date
Apr 12, 2005
Last update date
May 27, 2005
Contact name
Robert R Klevecz
E-mail(s)
rklevecz@coh.org
Phone
6263018348
Organization name
Beckman Research Institute of the City of Hope
Department
Biology
Lab
Cellular Dynamics
Street address
1450 E. Duarte Rd.
City
Duarte
State/province
CA
ZIP/Postal code
91010
Country
USA
Platform ID
GPL90
Series (1)
GSE2583
Genome_Wide_Oscillations_in_Yeast
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
4
A
0.843268
AFFX-MurIL10_at
0.8
A
0.957038
AFFX-MurIL4_at
0.4
A
0.963431
AFFX-MurFAS_at
4
A
0.645547
AFFX-BioB-5_at
123.1
P
0.012547
AFFX-BioB-M_at
164.8
P
0.00011
AFFX-BioB-3_at
176.6
P
0.001593
AFFX-BioC-5_at
252.2
P
0.00141
AFFX-BioC-3_at
219.5
P
0.00034
AFFX-BioDn-5_at
268
P
0.000044
AFFX-BioDn-3_at
1784.7
P
0.000044
AFFX-CreX-5_at
3516.1
P
0.000044
AFFX-CreX-3_at
4357.5
P
0.000044
AFFX-BioB-5_st
10.6
A
0.52976
AFFX-BioB-M_st
18.3
A
0.574038
AFFX-BioB-3_st
5.7
A
0.724854
AFFX-BioC-5_st
5.3
A
0.794268
AFFX-BioC-3_st
2.2
A
0.804734
AFFX-BioDn-5_st
21
A
0.5
AFFX-BioDn-3_st
32.9
A
0.0727
Total number of rows: 9335 Table truncated, full table size 225 Kbytes .Supplementary data files not provided