GEO help: Mouse over screen elements for information.
Status
Public on Apr 29, 2005
Title
Genome wide transcriptional oscillation gates DNA replication AFFY2_8
Sample type
RNA
Source name
time series sampling continuous gated synchrony yeast culture
Organism
Saccharomyces cerevisiae
Extracted molecule
total RNA
Description
Time series , cycle 2, sample 8, phase 251.7 degrees This sample is also known as AFFY2_8. Sample_strain: IFO 0233 diploid Keywords = oscillation, attractor, DNA-replication, redox gating, quantized,
Submission date
Apr 12, 2005
Last update date
May 27, 2005
Contact name
Robert R Klevecz
E-mail(s)
rklevecz@coh.org
Phone
6263018348
Organization name
Beckman Research Institute of the City of Hope
Department
Biology
Lab
Cellular Dynamics
Street address
1450 E. Duarte Rd.
City
Duarte
State/province
CA
ZIP/Postal code
91010
Country
USA
Platform ID
GPL90
Series (1)
GSE2583
Genome_Wide_Oscillations_in_Yeast
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
6.8
A
0.824672
AFFX-MurIL10_at
2.3
A
0.772364
AFFX-MurIL4_at
1.1
A
0.921998
AFFX-MurFAS_at
2.3
A
0.921998
AFFX-BioB-5_at
128.7
P
0.018281
AFFX-BioB-M_at
175.5
P
0.000195
AFFX-BioB-3_at
172.8
P
0.003595
AFFX-BioC-5_at
262.6
P
0.00141
AFFX-BioC-3_at
211.2
P
0.000509
AFFX-BioDn-5_at
241.3
P
0.000044
AFFX-BioDn-3_at
1773.9
P
0.000052
AFFX-CreX-5_at
3639.3
P
0.000044
AFFX-CreX-3_at
4510.7
P
0.000044
AFFX-BioB-5_st
4.3
A
0.631562
AFFX-BioB-M_st
7.6
A
0.672921
AFFX-BioB-3_st
5.8
A
0.824672
AFFX-BioC-5_st
8.4
A
0.794268
AFFX-BioC-3_st
2.8
A
0.772364
AFFX-BioDn-5_st
26.5
A
0.559354
AFFX-BioDn-3_st
30
A
0.116113
Total number of rows: 9335 Table truncated, full table size 225 Kbytes .Supplementary data files not provided