NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM48157 Query DataSets for GSM48157
Status Public on Apr 29, 2005
Title Genome wide transcriptional oscillation gates DNA replication AFFY3_26
Sample type RNA
 
Source name time series sampling continuous gated synchrony yeast culture
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Description Time series , cycle 3, sample 26, phase 116.4 degrees
This sample is also known as AFFY3_26.
Sample_strain: IFO 0233 diploid
Keywords = oscillation, attractor, DNA-replication, redox gating, quantized,
 
Submission date Apr 12, 2005
Last update date May 27, 2005
Contact name Robert R Klevecz
E-mail(s) rklevecz@coh.org
Phone 6263018348
Organization name Beckman Research Institute of the City of Hope
Department Biology
Lab Cellular Dynamics
Street address 1450 E. Duarte Rd.
City Duarte
State/province CA
ZIP/Postal code 91010
Country USA
 
Platform ID GPL90
Series (1)
GSE2583 Genome_Wide_Oscillations_in_Yeast

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-MurIL2_at 5.7 A 0.737173
AFFX-MurIL10_at 1.7 A 0.941556
AFFX-MurIL4_at 1.1 A 0.883887
AFFX-MurFAS_at 3.2 A 0.760937
AFFX-BioB-5_at 137.8 P 0.010317
AFFX-BioB-M_at 136.5 P 0.000095
AFFX-BioB-3_at 126.9 P 0.003212
AFFX-BioC-5_at 233.2 P 0.001593
AFFX-BioC-3_at 215.1 P 0.000297
AFFX-BioDn-5_at 180.7 P 0.000044
AFFX-BioDn-3_at 1528.3 P 0.000044
AFFX-CreX-5_at 3175.2 P 0.000044
AFFX-CreX-3_at 4139.2 P 0.000044
AFFX-BioB-5_st 15.2 A 0.48511
AFFX-BioB-M_st 22.9 A 0.617401
AFFX-BioB-3_st 5.4 A 0.834139
AFFX-BioC-5_st 7.5 A 0.794268
AFFX-BioC-3_st 2.9 A 0.737173
AFFX-BioDn-5_st 17.7 A 0.686277
AFFX-BioDn-3_st 28.9 A 0.102165

Total number of rows: 9335

Table truncated, full table size 225 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap