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Sample GSM4846 Query DataSets for GSM4846
Status Public on Mar 18, 2003
Title Universal reference GeneChip 2
Sample type RNA
 
Source name Stratagene Universal Human Reference RNA
Organism Homo sapiens
Extracted molecule total RNA
 
Description Purchased from Stratagene. RNA pooled from 10 human cell lines:
Adenocarcinoma, mammary gland
Hepatoblastoma, liver
Adenocarcinoma, cervix
Embryonal carcinoma, testis
Glioblastoma, brain
Melanoma
Liposarcoma
Histiocytic lymphoma; macrophase; histocyte
Lymphoblastic leukemia
Plasmacytoma; myeloma; B lymphocyte
 
Submission date Mar 17, 2003
Last update date Mar 16, 2009
Contact name David J Erle
E-mail(s) erle@itsa.ucsf.edu
Phone 415-206-5905
URL http://arrays.ucsf.edu
Organization name University of California San Francisco
Department Medicine
Lab Shared Microarray Facility
Street address Box 0854
City San Francisco
State/province CA
ZIP/Postal code 94143-0854
Country USA
 
Platform ID GPL8300
Series (1)
GSE344 Spotted long oligonucleotide arrays

Data table header descriptions
ID_REF
VALUE Log2 transformed expression values calculated using the Robust Multichip Average (RMA) method. This method is described in Irizarry, RA, Hobbs, B, Collin, F, Beazer-Barclay, YD, Antonellis, KJ, Scherf, U, Speed, TP. Exploration, Normalization, and Summaries of High Density Oligonucleotide Array Probe Level Data. Biostatistics, in press. RMA estimates are based upon a robust average of background corrected perfect match probe signal intensities. Quantile normalization was performed according to B. M. Bolstad et al., Bioinformatics 19:185, 2003.

Data table
ID_REF VALUE
1000_at 7.98
1001_at 4.46
1002_f_at 4.08
1003_s_at 6.24
1004_at 6.02
1005_at 7.43
1006_at 3.61
1007_s_at 8.20
1008_f_at 8.84
1009_at 10.44
100_g_at 8.17
1010_at 6.11
1011_s_at 7.91
1012_at 3.72
1013_at 5.15
1014_at 7.57
1015_s_at 6.18
1016_s_at 3.66
1017_at 4.02
1018_at 6.57

Total number of rows: 12610

Table truncated, full table size 175 Kbytes.




Supplementary file Size Download File type/resource
GSM4846.CEL.gz 2.7 Mb (ftp)(http) CEL

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