NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM484761 Query DataSets for GSM484761
Status Public on Dec 14, 2009
Title LuRKO d19 testis + 2.5mg testosterone - 24hB
Sample type RNA
 
Source name Testis, LH receptor knockout, 19 days post partum, treated with 2.5mg testosterone, response timecourse
Organism Mus musculus
Characteristics genotype/variation: LuRKO
tissue: testis
age post partum: 19 days + 24 hrs
testosterone dose: 2.5mg
time post testosterone injection: 24 hrs
Treatment protocol For the two rescue series, testosterone propionate was administered as a single intraperitoneal injection at 19 days post partum
Extracted molecule total RNA
Extraction protocol RNA was extracted with TRI reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description no additional information
Data processing The data were normalised using quantile normalisation with BeadStudio
 
Submission date Dec 14, 2009
Last update date Dec 14, 2009
Contact name Peter James Ellis
E-mail(s) p.j.i.ellis@kent.ac.uk
Phone 07808167834
Organization name University of Kent
Department School of Biosciences
Street address Stacey Building
City Canterbury
State/province Kent
ZIP/Postal code CT2 7NJ
Country United Kingdom
 
Platform ID GPL6887
Series (1)
GSE19453 Transcriptional profiling of luteinising hormone receptor deficient mice before and after testosterone treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 203.6406 0
ILMN_1212603 76.74248 0.525627
ILMN_1212605 877.9421 0
ILMN_1212607 84.54763 0.2955289
ILMN_1212612 100.9531 0.07524537
ILMN_1212614 63.36619 0.9302072
ILMN_1212619 160.9121 0
ILMN_1212623 116.7668 0
ILMN_1212625 762.9474 0
ILMN_1212626 338.562 0
ILMN_1212628 83.88346 0.3118866
ILMN_1212632 99.26727 0.08396947
ILMN_1212633 134.9063 0
ILMN_1212636 9479.942 0
ILMN_1212637 1038.4 0
ILMN_1212638 16576.42 0
ILMN_1212639 147.5264 0
ILMN_1212644 97.04018 0.1035987
ILMN_1212645 118.3857 0
ILMN_1212646 2873.511 0

Total number of rows: 45281

Table truncated, full table size 1244 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap