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Sample GSM484766 Query DataSets for GSM484766
Status Public on Dec 14, 2009
Title LuRKO d19 testis + testosterone, 24h post injection - 2.5ugA
Sample type RNA
 
Source name Testis, LH receptor knockout, dose/response to testosterone treatment given at 19 days post partum, assayed 24h post injection
Organism Mus musculus
Characteristics genotype/variation: LuRKO
tissue: testis
age post partum: 19 days + 24 hrs
testosterone dose: 2.5ug
time post testosterone injection: 24 hrs
Treatment protocol For the two rescue series, testosterone propionate was administered as a single intraperitoneal injection at 19 days post partum
Extracted molecule total RNA
Extraction protocol RNA was extracted with TRI reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description no additional information
Data processing The data were normalised using quantile normalisation with BeadStudio
 
Submission date Dec 14, 2009
Last update date Dec 14, 2009
Contact name Peter James Ellis
E-mail(s) p.j.i.ellis@kent.ac.uk
Phone 07808167834
Organization name University of Kent
Department School of Biosciences
Street address Stacey Building
City Canterbury
State/province Kent
ZIP/Postal code CT2 7NJ
Country United Kingdom
 
Platform ID GPL6887
Series (1)
GSE19453 Transcriptional profiling of luteinising hormone receptor deficient mice before and after testosterone treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 133.9455 0
ILMN_1212603 77.92712 0.4725644
ILMN_1212605 558.5431 0
ILMN_1212607 94.122 0.1511758
ILMN_1212612 100.3552 0.09182531
ILMN_1212614 65.32711 0.8734602
ILMN_1212619 123.8098 0
ILMN_1212623 128.6519 0
ILMN_1212625 1147.166 0
ILMN_1212626 270.9098 0
ILMN_1212628 74.84194 0.5744681
ILMN_1212632 127.7228 0
ILMN_1212633 239.9729 0
ILMN_1212636 9899.945 0
ILMN_1212637 803.6333 0
ILMN_1212638 15174.85 0
ILMN_1212639 196.8123 0
ILMN_1212644 75.90897 0.5363942
ILMN_1212645 101.0409 0.08510638
ILMN_1212646 3160.124 0

Total number of rows: 45281

Table truncated, full table size 1247 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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