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Sample GSM484773 Query DataSets for GSM484773
Status Public on Dec 14, 2009
Title LuRKO testis - postpartum development - 3 day B
Sample type RNA
 
Source name Testis, LH receptor knockout, postnatal developmental series
Organism Mus musculus
Characteristics genotype/variation: LuRKO
tissue: testis
age post partum: 3 days
testosterone dose: none
time post testosterone injection: n/a
Treatment protocol For the two rescue series, testosterone propionate was administered as a single intraperitoneal injection at 19 days post partum
Extracted molecule total RNA
Extraction protocol RNA was extracted with TRI reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description no additional information
Data processing The data were normalised using quantile normalisation with BeadStudio
 
Submission date Dec 14, 2009
Last update date Dec 14, 2009
Contact name Peter James Ellis
E-mail(s) p.j.i.ellis@kent.ac.uk
Phone 07808167834
Organization name University of Kent
Department School of Biosciences
Street address Stacey Building
City Canterbury
State/province Kent
ZIP/Postal code CT2 7NJ
Country United Kingdom
 
Platform ID GPL6887
Series (1)
GSE19453 Transcriptional profiling of luteinising hormone receptor deficient mice before and after testosterone treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 278.9215 0
ILMN_1212603 77.14812 0.5175824
ILMN_1212605 1092.471 0
ILMN_1212607 85.11745 0.2945055
ILMN_1212612 246.7753 0
ILMN_1212614 73.89474 0.6186813
ILMN_1212619 691.4967 0
ILMN_1212623 67.56387 0.8230769
ILMN_1212625 916.0678 0
ILMN_1212626 1210.528 0
ILMN_1212628 98.00562 0.1186813
ILMN_1212632 236.2616 0
ILMN_1212633 134.6408 0
ILMN_1212636 4413.221 0
ILMN_1212637 2228.189 0
ILMN_1212638 16576.42 0
ILMN_1212639 175.8263 0
ILMN_1212644 78.05871 0.4912088
ILMN_1212645 82.26891 0.3791209
ILMN_1212646 2082.107 0

Total number of rows: 45281

Table truncated, full table size 1247 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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