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Sample GSM484786 Query DataSets for GSM484786
Status Public on Dec 14, 2009
Title Control testis - postpartum development - N 13 day B
Sample type RNA
 
Source name Testis, age-matched controls, postnatal developmental series
Organism Mus musculus
Characteristics genotype/variation: WT
tissue: testis
age post partum: 13 days
testosterone dose: none
time post testosterone injection: n/a
Treatment protocol For the two rescue series, testosterone propionate was administered as a single intraperitoneal injection at 19 days post partum
Extracted molecule total RNA
Extraction protocol RNA was extracted with TRI reagent, followed by clean-up with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description no additional information
Data processing The data were normalised using quantile normalisation with BeadStudio
 
Submission date Dec 14, 2009
Last update date Dec 14, 2009
Contact name Peter James Ellis
E-mail(s) p.j.i.ellis@kent.ac.uk
Phone 07808167834
Organization name University of Kent
Department School of Biosciences
Street address Stacey Building
City Canterbury
State/province Kent
ZIP/Postal code CT2 7NJ
Country United Kingdom
 
Platform ID GPL6887
Series (1)
GSE19453 Transcriptional profiling of luteinising hormone receptor deficient mice before and after testosterone treatment

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 219.2761 0
ILMN_1212603 76.10662 0.5409292
ILMN_1212605 695.7675 0
ILMN_1212607 97.43027 0.1061947
ILMN_1212612 138.8139 0
ILMN_1212614 62.45969 0.9369469
ILMN_1212619 226.6082 0
ILMN_1212623 86.89042 0.2477876
ILMN_1212625 689.9587 0
ILMN_1212626 691.9965 0
ILMN_1212628 80.24926 0.3960177
ILMN_1212632 196.3223 0
ILMN_1212633 164.6036 0
ILMN_1212636 5227.356 0
ILMN_1212637 1748.332 0
ILMN_1212638 18612.61 0
ILMN_1212639 127.6308 0
ILMN_1212644 95.32378 0.1261062
ILMN_1212645 76.39648 0.5320796
ILMN_1212646 1851.06 0

Total number of rows: 45281

Table truncated, full table size 1244 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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