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Sample GSM487521 Query DataSets for GSM487521
Status Public on Dec 19, 2009
Title bmPMN-A2
Sample type RNA
 
Source name bone marrow neutrophils
Organism Homo sapiens
Characteristics cell type: bone marrow neutrophils
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's recommendations
Label biotin
Label protocol Total RNA was biotinylated according to manufacturer's recommendations
 
Hybridization protocol Hybridization was according to manufacturer's recommendations
Scan protocol MicroArray Suite 5
Description KThe-RH-bm-PMN-U133A-b1
Data processing Fluorescence signals were normalized using dChip version 1.3, expression values were calculated using the perfect match/mismatch difference model by Li and Wong
 
Submission date Dec 18, 2009
Last update date Sep 01, 2016
Contact name Troels Torben Marstrand
E-mail(s) tmarstra@princeton.edu
Organization name Princeton University
Street address Lewis-Sigler Institute Princeton University
City Princeton
State/province NJ
ZIP/Postal code 08540
Country USA
 
Platform ID GPL96
Series (1)
GSE19556 Transcriptional program of terminal granulocytic differentation
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE dChip normalized expression values

Data table
ID_REF VALUE
AFFX-DapX-5_at 1.27
AFFX-DapX-M_at 93.22
AFFX-DapX-3_at 68.49
AFFX-LysX-5_at 94.47
AFFX-LysX-M_at 49.12
AFFX-LysX-3_at 74.76
AFFX-PheX-5_at 110.64
AFFX-PheX-M_at 42.21
AFFX-PheX-3_at 212.69
AFFX-ThrX-5_at 218.81
AFFX-ThrX-M_at 85.74
AFFX-ThrX-3_at 2.91
AFFX-TrpnX-5_at 123.2
AFFX-TrpnX-M_at 8.6
AFFX-TrpnX-3_at 61.93
AFFX-r2-Ec-bioB-5_at 602.14
AFFX-r2-Ec-bioB-M_at 56.31
AFFX-r2-Ec-bioB-3_at 23.66
AFFX-r2-Ec-bioC-5_at 50.39
AFFX-r2-Ec-bioC-3_at 109.87

Total number of rows: 22283

Table truncated, full table size 369 Kbytes.




Supplementary file Size Download File type/resource
GSM487521.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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