|
| Status |
Public on Jun 23, 2021 |
| Title |
Adip.ChIPseq_GR.A7.Dex.1 |
| Sample type |
SRA |
| |
|
| Source name |
Adipocyte
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: hASC-derived adipocytes
chip antibody: GR
|
| Treatment protocol |
adipocytes were treated with 1uM dexamethasone for 24h beginning at day 24 for RNA-seq, 6h beginning at day 20 for ChIP-seq,
hepatocytes were treated with 1uM dexamethasone for 24h beginning at day 20 for RNA-seq, 6h beginning at day 20 for ChIP-seq, ATAC-seq and ChIA-PET
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
none provided by the submitter
|
| |
|
| Library strategy |
ChIP-Seq |
| Library source |
genomic |
| Library selection |
ChIP |
| Instrument model |
HiSeq X Ten |
| |
|
| Description |
MergedPeakFile.Adipocyte.txt
|
| Data processing |
none provided by the submitter
Genome_build: hg38
|
| |
|
| Submission date |
Dec 14, 2020 |
| Last update date |
Jun 23, 2021 |
| Contact name |
Chunjie Jiang |
| E-mail(s) |
chunjie.jiang917@outlook.com
|
| Phone |
2153164211
|
| Organization name |
University of Pennsylvania
|
| Department |
Institute for Diabetes, Obesity, and Metabolism
|
| Lab |
Mitchell A. Lazar
|
| Street address |
3400 Civic Center Boulevard
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platform ID |
GPL20795 |
| Series (1) |
| GSE163061 |
Individual-specific functional epigenomics reveals genetic determinants of adverse metabolic effects of glucocorticoids |
|
| Relations |
| BioSample |
SAMN17077980 |
| SRA |
SRX9683850 |
