|
Status |
Public on Nov 14, 2010 |
Title |
ICN 3-5, DN rep 2 |
Sample type |
RNA |
|
|
Source name |
Day 6 embryoid body
|
Organism |
Mus musculus |
Characteristics |
strain: Ainv15 age: Day 6 tissue: sorted cells from embryoid body
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
ICN3-5 DN_0808
|
Data processing |
The data were normalised using quantile normalisation with IlluminaGUI in R
|
|
|
Submission date |
Jan 21, 2010 |
Last update date |
Jan 21, 2010 |
Contact name |
Il-Ho Jang |
E-mail(s) |
ilho_jang@student.hms.harvard.edu
|
Organization name |
Children's Hospital Boston
|
Department |
Hematology/Oncology
|
Lab |
Geoge Daley's lab
|
Street address |
Karp Bld, rm 7004, 1 Blackfan circle
|
City |
Boston |
State/province |
MA |
ZIP/Postal code |
02115 |
Country |
USA |
|
|
Platform ID |
GPL6885 |
Series (1) |
GSE19951 |
Gene expression analysis of murine day 6 embryoid bodies (EBs ) with or without Notch1 (ICN1) induction. |
|