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| Status |
Public on May 22, 2005 |
| Title |
t06 |
| Sample type |
RNA |
| |
|
| Source name |
t06, surgically resected from patient of gastric cancer.
|
| Organism |
Homo sapiens |
| Extracted molecule |
total RNA |
| |
|
| Description |
Sample_ID:t06 // Patient:J-111 // Histology:Intestinal // Metastasis:+ // p53_mut:++ // E-cadherin_mut:+ // beta-Catenin_mut:++
Keywords = Gastric cancer
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| |
|
| Submission date |
May 18, 2005 |
| Last update date |
May 29, 2005 |
| Contact name |
Shogo Yamamoto |
| E-mail(s) |
yamamoto@genome.rcast.u-tokyo.ac.jp
|
| Organization name |
The University of Tokyo
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| Department |
Research Center for Advanced Science and Technology
|
| Lab |
Genomescience
|
| Street address |
4-6-1 Komaba, Megro-ku
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| City |
Tokyo |
| ZIP/Postal code |
1538904 |
| Country |
Japan |
| |
|
| Platform ID |
GPL80 |
| Series (1) |
| GSE2685 |
Global gene expression analysis of gastric cancer by oligonucleotide microarrays |
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| Data table header descriptions |
| ID_REF |
"; |
| VALUE |
'signal' a measure of the abundance of a transcript"; |
| ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)"; |
| DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call"; |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| A28102_at |
32.3 |
A |
0.139482 |
| AB000114_at |
12 |
A |
0.156732 |
| AB000115_at |
76.8 |
P |
0.006187 |
| AB000220_at |
35.4 |
P |
0.001102 |
| AB000381_s_at |
3.8 |
A |
0.645547 |
| AB000409_at |
150.9 |
P |
0.001593 |
| AB000410_s_at |
11.2 |
A |
0.860518 |
| AB000449_at |
35.3 |
P |
0.033677 |
| AB000450_at |
98.4 |
P |
0.003212 |
| AB000460_at |
254.4 |
P |
0.000509 |
| AB000462_at |
11 |
A |
0.544587 |
| AB000464_at |
72.6 |
P |
0.039661 |
| AB000466_at |
14.2 |
A |
0.976071 |
| AB000467_at |
27.2 |
A |
0.860518 |
| AB000468_at |
194.4 |
P |
0.004017 |
| AB000584_at |
322 |
P |
0.013811 |
| AB000816_s_at |
1.6 |
A |
0.843268 |
| AB000895_at |
15.3 |
A |
0.699394 |
| AB000896_at |
23.7 |
A |
0.544587 |
| AB000897_at |
6.7 |
A |
0.760937 |
Total number of rows: 7129
Table truncated, full table size 187 Kbytes.
| Supplementary data files not provided |
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