NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM520059 Query DataSets for GSM520059
Status Public on Jun 30, 2014
Title 19382_case_4hrs_BCG_stimulated
Sample type RNA
 
Source name PBMC isolated from BCG vaccinated_case. Stimulation time and condition: 4 hrs BCG stimulated.
Organism Homo sapiens
Characteristics tissue: pbmc isolated from bcg vaccinated_case
stimulation time and condition: 4 hrs BCG stimulated
Extracted molecule total RNA
Extraction protocol not provided
Label Cy3
Label protocol not provided
 
Hybridization protocol not provided
Scan protocol not provided
Description Simple annotation: Antigen Stimulation, PBMC
Image: http://smd.stanford.edu/MicroArray/gifs//86723.gif
Data processing Illumina BeadStudio
 
Submission date Mar 09, 2010
Last update date Jun 30, 2014
Contact name Helen Alison Fletcher
E-mail(s) helen.fletcher@lshtm.ac.uk
Phone +44 (0) 20 7927 2666
Organization name London School of Hygiene & Tropical Medicine
Department IID
Street address Keppel Street
City London
ZIP/Postal code W1CE 7HT
Country United Kingdom
 
Platform ID GPL6255
Series (1)
GSE20716 PBMC expression profiles of BCG vaccine protected infants and of BCG vaccinated infants who develop tuberculosis disease

Data table header descriptions
ID_REF
VALUE AVG_SIGNAL
MIN_SIGNAL
MAX_SIGNAL
NBEADS
BEAD_STDEV
DETECTION_P_VALUE
NARRAY
ARRAY_STDEV

Data table
ID_REF VALUE MIN_SIGNAL MAX_SIGNAL NBEADS BEAD_STDEV DETECTION_P_VALUE NARRAY ARRAY_STDEV
ILMN_3373 -11.9 -11.9 -11.9 54 15 .11723 1 null
ILMN_23791 465.4 465.4 465.4 46 91 1 1 null
ILMN_19370 188.3 188.3 188.3 38 50 .98466 1 null
ILMN_2509 -9.6 -9.6 -9.6 35 16 .17655 1 null
ILMN_15439 7.5 7.5 7.5 44 28 .79379 1 null
ILMN_21178 15.4 15.4 15.4 35 27 .91808 1 null
ILMN_17459 769.4 769.4 769.4 43 169 1 1 null
ILMN_18474 55.6 55.6 55.6 41 22 .99718 1 null
ILMN_2575 -7.4 -7.4 -7.4 50 24 .25706 1 null
ILMN_18271 21.8 21.8 21.8 38 28 .60786 1 null
ILMN_14912 -1.2 -1.2 -1.2 45 22 .53741 1 null
ILMN_13960 199.7 199.7 199.7 45 61 1 1 null
ILMN_28166 46.6 46.6 46.6 47 41 .99294 1 null
ILMN_10480 23.6 23.6 23.6 40 22 .96328 1 null
ILMN_10959 1063.5 1063.5 1063.5 42 204 .9597 1 null
ILMN_19171 3.4 3.4 3.4 40 28 .6935 1 null
ILMN_26895 35.2 35.2 35.2 44 37 .9998 1 null
ILMN_1375 238.2 238.2 238.2 32 75 1 1 null
ILMN_3922 4.9 4.9 4.9 42 30 .74576 1 null
ILMN_137905 6.8 6.8 6.8 51 24 .77825 1 null

Total number of rows: 20589

Table truncated, full table size 894 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap