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Sample GSM52642

Query DataSets for GSM52642

Status

Public on Jun 03, 2005

Title

NuGEN Tumor Sample 1

Sample type

RNA

Source name

Total RNA from Breast Adenocarcinoma Cell Line

Organism

Homo sapiens

Extracted molecule

total RNA

Description

This sample is part of a study that compares small sample amplification technologies. The analysis looks at differential gene expression when compared to one round of T7 amplification. A tumor cell line was used in comparison to a human reference RNA in this study.
Keywords = amplification
Keywords = small sample
Keywords = Affymetrix

Submission date

May 29, 2005

Last update date

Jun 02, 2005

Contact name

Chin-Yi Chu

E-mail(s)

chinyi_chu@urmc.rochester.edu

Phone

(585)273-2850

Organization name

University of Rochester

Department

Environmental Medicine

Lab

Functional Genomic Center

Street address

75 Elmwood Avenue

City

Rochester

State/province

ZIP/Postal code

14642

Country

USA

Platform ID

GPL571

Series (1)

GSE2723

Small Sample Amplification Technologies

Data table header descriptions
ID_REF
VALUE	RMA

Data table
ID_REF	VALUE
AFFX-BioB-5_at	570.0167221
AFFX-BioB-M_at	1276.329089
AFFX-BioB-3_at	1005.202251
AFFX-BioC-5_at	2020.197727
AFFX-BioC-3_at	1150.557632
AFFX-BioDn-5_at	3280.485655
AFFX-BioDn-3_at	6616.777636
AFFX-CreX-5_at	10494.27048
AFFX-CreX-3_at	12521.45164
AFFX-DapX-5_at	6.395119478
AFFX-DapX-M_at	6.294512436
AFFX-DapX-3_at	5.25455799
AFFX-LysX-5_at	6.075340382
AFFX-LysX-M_at	6.144678883
AFFX-LysX-3_at	8.355429691
AFFX-PheX-5_at	5.591837178
AFFX-PheX-M_at	5.74254239
AFFX-PheX-3_at	14.60529448
AFFX-ThrX-5_at	5.899073255
AFFX-ThrX-M_at	5.311444095

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM52642.CEL.gz	3.2 Mb	(ftp)(http)	CEL
GSM52642.EXP.gz	369 b	(ftp)(http)	EXP