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Sample GSM52657

Query DataSets for GSM52657

Status

Public on Jun 03, 2005

Title

Affy 1x Tumor Sample 3

Sample type

RNA

Source name

Total RNA from Breast Adenocarcinoma Cell Line

Organism

Homo sapiens

Extracted molecule

total RNA

Description

This sample is part of a study that compares small sample amplification technologies. The analysis looks at differential gene expression when compared to one round of T7 amplification. A tumor cell line was used in comparison to a human reference RNA in this study.
Keywords = amplification
Keywords = small sample
Keywords = Affymetrix

Submission date

May 29, 2005

Last update date

Jun 02, 2005

Contact name

Chin-Yi Chu

E-mail(s)

chinyi_chu@urmc.rochester.edu

Phone

(585)273-2850

Organization name

University of Rochester

Department

Environmental Medicine

Lab

Functional Genomic Center

Street address

75 Elmwood Avenue

City

Rochester

State/province

ZIP/Postal code

14642

Country

USA

Platform ID

GPL571

Series (1)

GSE2723

Small Sample Amplification Technologies

Data table header descriptions
ID_REF
VALUE	RMA

Data table
ID_REF	VALUE
AFFX-BioB-5_at	221.3327263
AFFX-BioB-M_at	230.6080411
AFFX-BioB-3_at	152.8773167
AFFX-BioC-5_at	493.2188151
AFFX-BioC-3_at	579.9358838
AFFX-BioDn-5_at	760.5999666
AFFX-BioDn-3_at	3440.03332
AFFX-CreX-5_at	5285.031898
AFFX-CreX-3_at	7807.873736
AFFX-DapX-5_at	26.91059857
AFFX-DapX-M_at	22.99851806
AFFX-DapX-3_at	24.41097941
AFFX-LysX-5_at	18.47737064
AFFX-LysX-M_at	29.66047573
AFFX-LysX-3_at	21.32918418
AFFX-PheX-5_at	25.80813332
AFFX-PheX-M_at	20.32816401
AFFX-PheX-3_at	132.9625014
AFFX-ThrX-5_at	37.56938873
AFFX-ThrX-M_at	23.68599212

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM52657.CEL.gz	3.4 Mb	(ftp)(http)	CEL
GSM52657.EXP.gz	367 b	(ftp)(http)	EXP