|
Status |
Public on Mar 23, 2011 |
Title |
dicer_ko_cortex |
Sample type |
SRA |
|
|
Source name |
cortex
|
Organism |
Mus musculus |
Characteristics |
strain: C57BL/6 age: P21 genotype/variation: dicer ko
|
Treatment protocol |
The hippocampus and cortex were manually dissected. Total RNA was prepared with Trizol Reagent
|
Extracted molecule |
total RNA |
Extraction protocol |
Libraries were constructed with the Illumina small RNA kit version 1.5
|
|
|
Library strategy |
RNA-Seq |
Library source |
transcriptomic |
Library selection |
size fractionation |
Instrument model |
Illumina Genome Analyzer II |
|
|
Description |
small RNA-Seq
|
Data processing |
Illumina Pipeline v1.3
|
|
|
Submission date |
Mar 26, 2010 |
Last update date |
May 15, 2019 |
Contact name |
Robert Blelloch |
E-mail(s) |
blellochr@stemcell.ucsf.edu
|
Phone |
415-476-2838
|
Organization name |
University of California, San Francisco
|
Street address |
513 Parnassus Avenue, Campus Box #0525
|
City |
San Francisco |
State/province |
CA |
ZIP/Postal code |
94143 |
Country |
USA |
|
|
Platform ID |
GPL9250 |
Series (1) |
GSE21090 |
Functional non-canonical microRNAs in the mammalian hippocampus and cortex |
|
Relations |
SRA |
SRX018287 |
BioSample |
SAMN00010648 |