GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM53300
Query DataSets for GSM53300
Status
Public on Jul 06, 2005
Title
brain, amygdala: Stress-Amygdala_e1_le2
Sample type
RNA
Source name
brain, amygdala
Organism
Rattus norvegicus
Extracted molecule
total RNA
Description
Amygdala
Treatment, type=pharmacogenomic_treatment, description=Chronic Immobilization Stress
Submission date
Jul 01, 2005
Last update date
May 22, 2013
Contact name
Winnie Liang
E-mail(s)
wliang@tgen.org
Organization name
Translational Genomics
Street address
445 N. Fifth Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85012
Country
USA
Platform ID
GPL1355
Series (1)
GSE2870
Ogle-5P01NS037520-05
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS 5 or GCOS software.
ABS_CALL
The detection value calculated by the MAS 5 or GCOS software
DETECTION P-VALUE
The detection p-value calculated by the MAS 5 or GCOS software
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
189.11635
P
0.000225
AFFX-BioB-M_at
308.46506
P
0.000044
AFFX-BioB-3_at
146.6516
P
0.000060
AFFX-BioC-5_at
549.3537
P
0.000052
AFFX-BioC-3_at
686.427
P
0.000052
AFFX-BioDn-5_at
1164.2628
P
0.000052
AFFX-BioDn-3_at
2371.5852
P
0.000044
AFFX-CreX-5_at
6909.357
P
0.000052
AFFX-CreX-3_at
8063.745
P
0.000044
AFFX-DapX-5_at
176.25142
P
0.000060
AFFX-DapX-M_at
339.35263
P
0.000446
AFFX-DapX-3_at
462.62582
P
0.000052
AFFX-LysX-5_at
29.361095
P
0.000340
AFFX-LysX-M_at
49.25066
P
0.002023
AFFX-LysX-3_at
108.449165
P
0.000195
AFFX-PheX-5_at
50.365273
P
0.000972
AFFX-PheX-M_at
69.77584
P
0.000258
AFFX-PheX-3_at
42.296707
P
0.000225
AFFX-ThrX-5_at
44.079254
P
0.002275
AFFX-ThrX-M_at
67.77746
P
0.000446
Total number of rows:
31099
Table truncated, full table size
965 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM53300.cel.gz
4.1 Mb
(ftp)
(http)
CEL
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
