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Sample GSM533309 Query DataSets for GSM533309
Status Public on Apr 16, 2010
Title FAH iPSCs #7
Sample type RNA
Source name cell culture of FAH iPSCs, line #7
Organism Mus musculus
Characteristics cell type: induced pluripotent stem cells
genotype: FAH(-/-)
Extracted molecule total RNA
Extraction protocol Trizol, according to manufacturer's instructions
Label Cy3
Label protocol Ambion TotalPrep RNA Amplification Kit. RNA input: 400ng, IVT: 12h
Hybridization protocol According to manufacturer's instructions. Hybridization time: 18h
Scan protocol Illumina iScan system using default settings
Description N/A
Data processing Cubic Spline normalization with background subtraction in BeadStudio.
Submission date Apr 14, 2010
Last update date Apr 15, 2010
Contact name Boris Greber
Organization name Max Planck Institute for Molecular Biomedicine
Department Cell and Developmental Biology
Street address Röntgenstraße 20
City Münster
ZIP/Postal code 48149
Country Germany
Platform ID GPL6885
Series (1)
GSE21343 Global gene expression profiles of mouse ESCs, disease-specific iPSCs, and gene-corrected iPSCs

Data table header descriptions
VALUE normalized and background subtracted intensity value

Data table
ILMN_1212607 -1.012839
ILMN_1212612 -5.031503
ILMN_1212619 7.743279
ILMN_1212628 1.735425
ILMN_1212632 6.309669
ILMN_1212636 2510.126
ILMN_1212637 565.4338
ILMN_1212645 10.15318
ILMN_1212648 216.9099
ILMN_1212653 21.1724
ILMN_1212672 363.993
ILMN_1212682 10.07023
ILMN_1212683 -5.747176
ILMN_1212685 -2.111352
ILMN_1212692 207.5791
ILMN_1212693 -0.6288453
ILMN_1212695 -4.634961
ILMN_1212698 -0.7391481
ILMN_1212702 23.53028
ILMN_1212703 44.04793

Total number of rows: 25697

Table truncated, full table size 557 Kbytes.

Supplementary file Size Download File type/resource
GSM533309_1_FAH_iPSCs_7_raw.txt.gz 187.9 Kb (ftp)(http) TXT
Raw data provided as supplementary file
Processed data included within Sample table

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