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Sample GSM533310 Query DataSets for GSM533310
Status Public on Apr 16, 2010
Title OG2 ESCs
Sample type RNA
Source name cell culture of OG2 ESCs
Organism Mus musculus
Characteristics cell type: mouse embryonic stem cells
cell line: OG2
Extracted molecule total RNA
Extraction protocol Trizol, according to manufacturer's instructions
Label Cy3
Label protocol Ambion TotalPrep RNA Amplification Kit. RNA input: 400ng, IVT: 12h
Hybridization protocol According to manufacturer's instructions. Hybridization time: 18h
Scan protocol Illumina iScan system using default settings
Description N/A
Data processing Cubic Spline normalization with background subtraction in BeadStudio.
Submission date Apr 14, 2010
Last update date Apr 15, 2010
Contact name Boris Greber
Organization name Max Planck Institute for Molecular Biomedicine
Department Cell and Developmental Biology
Street address Röntgenstraße 20
City Münster
ZIP/Postal code 48149
Country Germany
Platform ID GPL6885
Series (1)
GSE21343 Global gene expression profiles of mouse ESCs, disease-specific iPSCs, and gene-corrected iPSCs

Data table header descriptions
VALUE normalized and background subtracted intensity value

Data table
ILMN_1212607 2.69116
ILMN_1212612 0.186324
ILMN_1212619 -3.97893
ILMN_1212628 -6.309906
ILMN_1212632 15.16678
ILMN_1212636 2936.233
ILMN_1212637 647.4153
ILMN_1212645 9.399076
ILMN_1212648 168.4665
ILMN_1212653 8.262358
ILMN_1212672 192.9431
ILMN_1212682 8.125529
ILMN_1212683 -5.209504
ILMN_1212685 0.176622
ILMN_1212692 234.4575
ILMN_1212693 -2.744735
ILMN_1212695 -4.42789
ILMN_1212698 -2.959675
ILMN_1212702 -5.199983
ILMN_1212703 53.6357

Total number of rows: 25697

Table truncated, full table size 557 Kbytes.

Supplementary file Size Download File type/resource
GSM533310_OG2_ESCs_raw.txt.gz 188.0 Kb (ftp)(http) TXT
Raw data provided as supplementary file
Processed data included within Sample table

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