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GEO accession:
Sample GSM5435
Query DataSets for GSM5435
Status
Public on May 02, 2003
Title
Adult testis - somatic cells
Sample type
SAGE
Anchor
NlaIII
Tag Count
81556
Tag Length
10
Source name
adult mouse testis
Organism
Mus musculus
Extracted molecule
total RNA
Description
Adult mice were treated with busulphan (30mg/Kg). RNA was extracted from testes 60 days later. At this stage the testes were largely devoid of germ-cells
Keywords = testis, mouse, somatic
Submission date
Apr 04, 2003
Last update date
Nov 19, 2008
Contact name
Peter James O'Shaughnessy
E-mail(s)
p.j.o'shaughnessy@vet.gla.ac.uk
Phone
++ 44 141 330 5793
Fax
++ 44 141 330 5797
Organization name
University of Glasgow Veterinary School
Department
Veterinary Preclinical Studies
Street address
Bearsden Rd
City
Glasgow
ZIP/Postal code
G61 1QH
Country
United Kingdom
Platform ID
GPL11
Series (1)
GSE366
Somatic cells in testes
Data table header descriptions
TAG
Tag sequence
COUNT
Number of times tag appears in library
TPM
tags per million
Data table
TAG
COUNT
TPM
ACCTGTGCCC
5876
72048.65
GCTGCCCTCC
2084
25552.99
GTGGCTCACA
1140
13978.13
ATACTGACAT
951
11660.70
TCTCCAGGCG
611
7491.78
AGCAATTCAA
414
5076.27
CCTTGACACC
410
5027.22
CAAACTCTCA
363
4450.93
AGCAGTCCCC
269
3298.35
TGGGTTGTCT
261
3200.26
CCTTGCTCAA
247
3028.59
TGACCCCGGG
241
2955.02
ATGACTGATA
225
2758.84
GTGACCTGGC
225
2758.84
AACTGAGGGG
202
2476.83
TTGTCAGGTA
187
2292.90
GGCTTTGGTC
185
2268.38
ATAATACATA
183
2243.86
TGATATGAGC
182
2231.60
CAGGACTCCG
179
2194.81
Total number of rows:
22840
Table truncated, full table size
426 Kbytes
.
Supplementary data files not provided
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