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Sample GSM565269 Query DataSets for GSM565269
Status Public on Jul 13, 2010
Title CD8Tcell-N0-1 [HG-U133A]
Sample type RNA
 
Source name CD8+ T cells from PBMC
Organism Homo sapiens
Characteristics tissue: peripheral blood
cell type: CD8+ T cells
treatment agent: NA
time post-treatment: NA
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit (Qiagen)
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol cRNA was hybridized on GeneChip HGU133A.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
Description Gene expression data from resting CD8+ T cells
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
 
Submission date Jul 12, 2010
Last update date Sep 01, 2016
Contact name Alex Abbas
E-mail(s) abbas@gene.com
Organization name Genentech, Inc.
Department Bioinformatics
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL96
Series (1)
GSE22886 Expression profiles from a variety of resting and activated human immune cells
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
1007_s_at 706.987
1053_at 508.857
117_at 365.47
121_at 2266.325
1255_g_at 82.306
1294_at 1987.036
1316_at 331.817
1320_at 36.18
1405_i_at 12529.007
1431_at 190.82
1438_at 64.05
1487_at 869.026
1494_f_at 672.653
1598_g_at 894.98
160020_at 951.611
1729_at 2519.145
1773_at 346.419
177_at 200.939
179_at 1745.262
1861_at 554.9

Total number of rows: 22283

Table truncated, full table size 410 Kbytes.




Supplementary file Size Download File type/resource
GSM565269.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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