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Sample GSM565367 Query DataSets for GSM565367
Status Public on Jul 13, 2010
Title DendriticCell-Control-2 [HG-U133A]
Sample type RNA
 
Source name CD14+ cells from PBMC
Organism Homo sapiens
Characteristics tissue: peripheral blood
cell type: CD14+ cells
treatment agent: NA
time post-treatment: control
Treatment protocol NA
Growth protocol NA
Extracted molecule total RNA
Extraction protocol RNeasy Mini Kit (Qiagen)
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol cRNA was hybridized on GeneChip HGU133A.
Scan protocol GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
Description Gene expression data from resting dendritic cells from peripheral blood
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
 
Submission date Jul 12, 2010
Last update date Sep 01, 2016
Contact name Alex Abbas
E-mail(s) abbas@gene.com
Organization name Genentech, Inc.
Department Bioinformatics
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL96
Series (1)
GSE22886 Expression profiles from a variety of resting and activated human immune cells
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity

Data table
ID_REF VALUE
1007_s_at 508.652
1053_at 796.392
117_at 484.305
121_at 2155.145
1255_g_at 91.567
1294_at 729.63
1316_at 307.68
1320_at 52.072
1405_i_at 22.999
1431_at 158.383
1438_at 203.999
1487_at 1360.767
1494_f_at 687.899
1598_g_at 4177.906
160020_at 1622.539
1729_at 799.02
1773_at 453.487
177_at 224.886
179_at 2114.389
1861_at 275.231

Total number of rows: 22283

Table truncated, full table size 409 Kbytes.




Supplementary file Size Download File type/resource
GSM565367.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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