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Sample GSM60397 Query DataSets for GSM60397
Status Public on Dec 06, 2005
Title tumor immune evasion - P0 cell line
Sample type RNA
Source name mouse cancer cell line, P0/TC-1
Organism Mus musculus
Characteristics strain - C57BL/6
gender - female
tissue - P0/TC-1 is a cancer cell line derived from lung fibroblasts.
Treatment protocol P0 is a cancer cell line susceptible to immune attack. This is a control cell line.
Growth protocol The cell line was cultured in vitro in 10-cm dishes until 70-75% confluency and then total RNA was isolated.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TRIzol reagent (Invitrogen), followed by a clean-up step using RNeasy mini kit (Qiagen).
Label biotin-labeled cRNA, detected with streptavidin phycoerythin conjugate
Description This is one of 4 biological replicates for P0 control cell line.
Data processing background correction made with RMA, Quantile Normalization, GC-RMA
Submission date Jun 06, 2005
Last update date Jun 07, 2005
Contact name Ken-Yu Lin
Phone 410-614-4906
Organization name Johns Hopkins University School of Medicine
Department Pathology
Lab T.-C. Wu
Street address 720 Rutland Ave, Ross 512
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
Platform ID GPL1261
Series (1)
GSE2774 Identification of tumor immune evasion mechanism using P0 and P3 cell lines

Data table header descriptions
VALUE Quantile Normalized data

Data table
1415670_at 3098.503343
1415671_at 568.706098
1415672_at 2682.48356
1415673_at 556.842271
1415674_a_at 965.959257
1415675_at 544.686052
1415676_a_at 4914.532865
1415677_at 1102.887606
1415678_at 1003.289179
1415679_at 1563.919304
1415680_at 2706.108656
1415681_at 657.310466
1415682_at 784.591174
1415683_at 2585.955432
1415684_at 375.190011
1415685_at 400.710862
1415686_at 2033.766454
1415687_a_at 4885.258889
1415688_at 1010.170116
1415689_s_at 126.467524

Total number of rows: 45101

Table truncated, full table size 932 Kbytes.

Supplementary data files not provided

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