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Sample GSM60400 Query DataSets for GSM60400
Status Public on Dec 06, 2005
Title tumor immune evasion - P0 cell line-replicate 3
Sample type RNA
Source name mouse cancer cell line, P0/TC-1
Organism Mus musculus
Characteristics strain - C57BL/6
gender - female
tissue - P0/TC-1 is a cancer cell line derived from lung fibroblasts
Treatment protocol P0 is a cancer cell line susceptible to immune attack. This is a control cell line.
Growth protocol The cell line was cultured in vitro in 10-cm dishes until 70-75% confluency and then total RNA was isolated.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted using TRIzol reagent (Invitrogen), followed by a clean-up step using RNeasy mini kit (Qiagen).
Label biotin-labeled cRNA, detected with streptavidin phycoerythin conjugate
Description This is one of 4 biological replicates for P0 control cell line.
Data processing background correction made with RMA, Quantile Normalization, GC-RMA
Submission date Jun 06, 2005
Last update date Jun 07, 2005
Contact name Ken-Yu Lin
Phone 410-614-4906
Organization name Johns Hopkins University School of Medicine
Department Pathology
Lab T.-C. Wu
Street address 720 Rutland Ave, Ross 512
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
Platform ID GPL1261
Series (1)
GSE2774 Identification of tumor immune evasion mechanism using P0 and P3 cell lines

Data table header descriptions
VALUE data with quantile normalization

Data table
1415670_at 2800.933628
1415671_at 537.862089
1415672_at 2712.201985
1415673_at 659.869852
1415674_a_at 1102.960751
1415675_at 562.037329
1415676_a_at 5348.624058
1415677_at 1062.962247
1415678_at 1014.929322
1415679_at 1676.694105
1415680_at 2720.603966
1415681_at 627.117234
1415682_at 759.592641
1415683_at 2763.307384
1415684_at 334.150291
1415685_at 406.15938
1415686_at 1827.317756
1415687_a_at 5036.445294
1415688_at 991.502048
1415689_s_at 140.834593

Total number of rows: 45101

Table truncated, full table size 932 Kbytes.

Supplementary data files not provided

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