|
| Status |
Public on Feb 01, 2011 |
| Title |
MET2 |
| Sample type |
RNA |
| |
|
| Source name |
metastatic sarcoma
|
| Organism |
Canis lupus familiaris |
| Characteristics |
tissue type: Primary tumor
disease group: metastatic
|
| Treatment protocol |
Untreated tumors
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Rneasy mini-kit from Qiagen
|
| Label |
biotin
|
| Label protocol |
Affymetrix 1-cycle 3' IVT labeling kit
|
| |
|
| Hybridization protocol |
Following fragmentation, 2 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Canine GeneChip version 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
|
| Scan protocol |
GeneChips were scanned with GeneChip Scanner 3000
|
| Data processing |
Data were analyzed with JMPGenomics software (SAS). Normalization was performed with dChip.
|
| |
|
| Submission date |
Oct 08, 2010 |
| Last update date |
Feb 01, 2011 |
| Contact name |
Marlene Hauck |
| E-mail(s) |
marlene_hauck@ncsu.edu
|
| Organization name |
North Carolina State University
|
| Department |
Clinical Sciences
|
| Street address |
4700 Hillsborough Street
|
| City |
Raleigh |
| State/province |
NC |
| ZIP/Postal code |
27606 |
| Country |
USA |
| |
|
| Platform ID |
GPL3738 |
| Series (1) |
| GSE24601 |
Metastatic and Nonmetastatic canine soft tissue sarcoma comparison |
|
