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Sample GSM60707 Query DataSets for GSM60707
Status Public on Mar 22, 2006
Title Th cells_antiCD3+antiCD28+IL12+TGFbeta_6h_replicate 1a (U133A)
Sample type RNA
 
Source name Cord blood CD4+ cells
Organism Homo sapiens
Characteristics CD4+ cells isolated from randomly collected cord bloods of healthy neonates, cells pooled from different individuals
Biomaterial provider Turku University Central Hospital
Treatment protocol See Lund et al. J Immunol. 2003 Nov 15;171(10):5328-36.
Growth protocol See Lund et al. J Immunol. 2003 Nov 15;171(10):5328-36.
Extracted molecule total RNA
Extraction protocol See Lund et al. J Immunol. 2003 Nov 15;171(10):5328-36.
Label biotin
 
Description Th1+TGFbeta_6h_rep1
Data processing MAS5.0
 
Submission date Jun 09, 2005
Last update date Sep 01, 2016
Contact name Riikka Johanna Lund
E-mail(s) riikka.lund@utu.fi
Organization name University of Turku and Åbo Akademi University
Department Turku Centre for Biotechnology
Lab Molecular Immunology Group
Street address Tykistökatu 6 A
City Turku
ZIP/Postal code FIN-20521
Country Finland
 
Platform ID GPL96
Series (1)
GSE2770 Transcriptional profiles of Th cells induced to polarize to Th1 or Th2 direction in the presence or absence of TGFbeta
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF Affymetrix U133A probe ID
VALUE MAS5.0 calculated normalized signal intensity (target intensity 50)
ABS_CALL
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
207357_s_at 9.3 A 0.366211
209114_at 3.3 A 0.5
214783_s_at 17.5 A 0.067627
215104_at 1.4 A 0.780518
206992_s_at 29.2 P 0.037598
207803_s_at 1.2 A 0.780518
201443_s_at 394 P 0.000244
214764_at 40.2 P 0.000732
210127_at 12.2 A 0.466064
220144_s_at 3.1 A 0.5
206548_at 3 A 0.533936
208794_s_at 162 P 0.000244
210770_s_at 1 A 0.969727
214379_at 8.3 A 0.129639
201159_s_at 3.4 A 0.753906
202837_at 7.1 A 0.19458
206612_at 1.9 A 0.696289
217204_at 5.1 A 0.27417
220257_x_at 16.5 A 0.334473
221822_at 31.2 A 0.27417

Total number of rows: 22283

Table truncated, full table size 571 Kbytes.




Supplementary file Size Download File type/resource
GSM60707.CEL.gz 3.3 Mb (ftp)(http) CEL

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