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Sample GSM609167 Query DataSets for GSM609167
Status Public on Oct 16, 2010
Title wt_2
Sample type RNA
Source name E12.5 DRG RNA from WT mice
Organism Mus musculus
Characteristics genotype/variation: wild-type
cell type: E12.5 dorsal root ganglia (DRG)
Treatment protocol E12.5 DRGs from control and Erk1/2CKO(Wnt1) embryos derived from three independent litters were dissected in PBS supplemented with 10% RNAlater (Qiagen) and frozen on dry ice.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol (Invitrogen) and a Qiagen RNeasy Mini kit per manufacturer’s instructions.
Label Biotin
Label protocol Biotin
Hybridization protocol Illumina protocol
Scan protocol Illumina protocol
Description 4440724029_B
Data processing BeadStudio, quantile normalization
Submission date Oct 15, 2010
Last update date Oct 15, 2010
Contact name Giovanni Coppola
Phone 310-794-4172
Organization name UCLA
Department Psychiatry and Neurology
Lab Neurogenetics
Street address 1524 Gonda, 695 Charles Young Drive South
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
Platform ID GPL6885
Series (1)
GSE24730 Specific functions for ERK/MAPK signaling during PNS development

Data table header descriptions
VALUE Log2 transformed, quantile normalized expresssion levels

Data table
ILMN_2659724 7.014533473
ILMN_2706226 6.712954922
ILMN_1217123 7.305290379
ILMN_2780205 12.80751683
ILMN_2713160 6.763417559
ILMN_2650094 6.660542207
ILMN_2703479 6.725921268
ILMN_2952493 6.587396659
ILMN_2731592 7.457001545
ILMN_2729743 8.140245488
ILMN_1252621 8.761560696
ILMN_3162407 7.605852745
ILMN_2692952 7.000599058
ILMN_2910076 6.976044233
ILMN_2709047 9.448077965
ILMN_2718462 8.555166055
ILMN_2882078 9.281638055
ILMN_2882079 7.824600974
ILMN_2771368 6.988949416
ILMN_2724039 6.930106366

Total number of rows: 25697

Table truncated, full table size 624 Kbytes.

Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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