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Sample GSM609173 Query DataSets for GSM609173
Status Public on Oct 16, 2010
Title ko_4
Sample type RNA
Source name E12.5 DRG RNA from Erk1/2CKO(Wnt1) mice
Organism Mus musculus
Characteristics genotype/variation: E12.5 Erk1/2CKO(Wnt1)
cell type: E12.5 dorsal root ganglia (DRG)
Treatment protocol E12.5 DRGs from control and Erk1/2CKO(Wnt1) embryos derived from three independent litters were dissected in PBS supplemented with 10% RNAlater (Qiagen) and frozen on dry ice.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol (Invitrogen) and a Qiagen RNeasy Mini kit per manufacturer’s instructions.
Label Biotin
Label protocol Biotin
Hybridization protocol Illumina protocol
Scan protocol Illumina protocol
Description 4440724029_H
Data processing BeadStudio, quantile normalization
Submission date Oct 15, 2010
Last update date Oct 15, 2010
Contact name Giovanni Coppola
Phone 310-794-4172
Organization name UCLA
Department Psychiatry and Neurology
Lab Neurogenetics
Street address 1524 Gonda, 695 Charles Young Drive South
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
Platform ID GPL6885
Series (1)
GSE24730 Specific functions for ERK/MAPK signaling during PNS development

Data table header descriptions
VALUE Log2 transformed, quantile normalized expresssion levels

Data table
ILMN_2659724 7.098982344
ILMN_2706226 6.712460044
ILMN_1217123 7.216395472
ILMN_2780205 12.81258341
ILMN_2713160 6.80791807
ILMN_2650094 6.763559161
ILMN_2703479 6.805634978
ILMN_2952493 6.747497461
ILMN_2731592 7.69823599
ILMN_2729743 7.925445858
ILMN_1252621 8.903789004
ILMN_3162407 7.71524193
ILMN_2692952 6.966998171
ILMN_2910076 6.868451085
ILMN_2709047 9.490804833
ILMN_2718462 8.612542421
ILMN_2882078 9.501218912
ILMN_2882079 8.178664275
ILMN_2771368 6.981694176
ILMN_2724039 6.93743718

Total number of rows: 25697

Table truncated, full table size 624 Kbytes.

Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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