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Sample GSM618101 Query DataSets for GSM618101
Status Public on May 22, 2013
Title Adherent, rep1
Sample type RNA
 
Source name HUVEC
Organism Homo sapiens
Characteristics treatment: Adherent MP treated cells
cell type: HUVEC
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN Rneasy Plus mini kit according to manufacturer's protocol. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description H H 1
Data processing The data were normalised using quantile normalisation with GenomeStudio software.
 
Submission date Nov 04, 2010
Last update date May 22, 2013
Contact name Trinidad Montero
E-mail(s) t.monteromelendez@qmul.ac.uk
Organization name Whilliam Harvey Research Institute, Bart's and The London School of Medicine; Queen Mary University of London
Department Biochemical Pharmacology
Street address Charterhouse Square
City London
ZIP/Postal code EC1M 6BQ
Country United Kingdom
 
Platform ID GPL10558
Series (1)
GSE25154 Genome-wide analysis of the affect of neutrophil-derived microparticles on HUVECs

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 123.8018 0.3597403
ILMN_2055271 120.6594 0.425974
ILMN_1736007 114.1394 0.5779221
ILMN_2383229 125.2745 0.3272727
ILMN_1806310 116.0141 0.5428572
ILMN_1779670 101.1316 0.738961
ILMN_1653355 150.1958 0.03246753
ILMN_1717783 87.62046 0.874026
ILMN_1705025 127.0236 0.2974026
ILMN_1814316 121.4527 0.4116883
ILMN_2359168 102.016 0.7363636
ILMN_1731507 82.08991 0.9402598
ILMN_1787689 108.0985 0.6818182
ILMN_3241953 383.0089 0
ILMN_1745607 129.5967 0.2493507
ILMN_2136495 89.2743 0.8467532
ILMN_1668111 123.8237 0.3597403
ILMN_2295559 136.8289 0.1285714
ILMN_1735045 529.3107 0
ILMN_1680754 131.9041 0.2064935

Total number of rows: 47231

Table truncated, full table size 1355 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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