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Sample GSM618102 Query DataSets for GSM618102
Status Public on May 22, 2013
Title Adherent, rep2
Sample type RNA
 
Source name HUVEC
Organism Homo sapiens
Characteristics treatment: Adherent MP treated cells
cell type: HUVEC
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN Rneasy Plus mini kit according to manufacturer's protocol. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description H H 2
Data processing The data were normalised using quantile normalisation with GenomeStudio software.
 
Submission date Nov 04, 2010
Last update date May 22, 2013
Contact name Trinidad Montero
E-mail(s) t.monteromelendez@qmul.ac.uk
Organization name Whilliam Harvey Research Institute, Bart's and The London School of Medicine; Queen Mary University of London
Department Biochemical Pharmacology
Street address Charterhouse Square
City London
ZIP/Postal code EC1M 6BQ
Country United Kingdom
 
Platform ID GPL10558
Series (1)
GSE25154 Genome-wide analysis of the affect of neutrophil-derived microparticles on HUVECs

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 132.4848 0.2064935
ILMN_2055271 134.8398 0.161039
ILMN_1736007 114.1405 0.5727273
ILMN_2383229 129.6897 0.2701299
ILMN_1806310 123.4803 0.4038961
ILMN_1779670 85.66459 0.8948052
ILMN_1653355 130.7479 0.2532468
ILMN_1717783 81.8038 0.938961
ILMN_1705025 137.1778 0.1363636
ILMN_1814316 118.2082 0.5051948
ILMN_2359168 97.78398 0.7792208
ILMN_1731507 92.28653 0.8220779
ILMN_1787689 115.5509 0.5428572
ILMN_3241953 358.558 0
ILMN_1745607 109.7918 0.6558442
ILMN_2136495 85.72377 0.8935065
ILMN_1668111 140.2399 0.09740259
ILMN_2295559 133.9283 0.1792208
ILMN_1735045 568.3333 0
ILMN_1680754 137.9282 0.1233766

Total number of rows: 47231

Table truncated, full table size 1362 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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